def _make_footnote_rows(self, data, style):
data.append(Row(height=0.1))
blanks = self._get_average_blanks()
fontsize = 6
height = self.footnote_height
if blanks:
co2_blanks, furnace_blanks = blanks
average_furnace_blanks = 'Average blanks for Furnace: ({Ar40:0.3f}, {Ar39:0.3f}, {Ar38:0.3f}, ' \
'{Ar37:0.3f}, {Ar36:0.3f}), ' \
'x10<sup>-{sens_exp:}</sup> ' \
'for Ar<super>40</super>, Ar<super>39</super>, ' \
'Ar<super>38</super>, Ar<super>37</super>, Ar<super>36</super> ' \
'respectively'.format(**furnace_blanks)
frow = FooterRow(fontsize=fontsize, height=height)
frow.add_item(span=-1,
value=self._new_paragraph(average_furnace_blanks))
data.append(frow)
fr = FootNoteRow(fontsize=fontsize, height=height)
self._footnotes.append(self._new_paragraph('P: plateau step'))
txt = ', '.join([fi.text for fi in self._footnotes])
fr.add_item(value=txt, span=-1)
data.append(fr)
def _make_footnote_rows(self, data, style):
data.append(Row(height=0.1))
blanks = self._get_average_blanks()
fontsize = 6
height = self.footnote_height
if blanks:
co2_blanks, furnace_blanks = blanks
average_furnace_blanks = 'Average blanks for Furnace: ({Ar40:0.3f}, {Ar39:0.3f}, {Ar38:0.3f}, ' \
'{Ar37:0.3f}, {Ar36:0.3f}), ' \
'x10<sup>-{sens_exp:}</sup> ' \
'for Ar<super>40</super>, Ar<super>39</super>, ' \
'Ar<super>38</super>, Ar<super>37</super>, Ar<super>36</super> ' \
'respectively'.format(**furnace_blanks)
frow = FooterRow(fontsize=fontsize, height=height)
frow.add_item(span=-1, value=self._new_paragraph(average_furnace_blanks))
data.append(frow)
fr = FootNoteRow(fontsize=fontsize, height=height)
self._footnotes.append(self._new_paragraph('P: plateau step'))
txt = ', '.join([fi.text for fi in self._footnotes])
fr.add_item(value=txt, span=-1)
data.append(fr)
def _make_footnote_rows(self, data, style):
data.append(Row(height=0.1))
height = self.footnote_height
blanks = self._get_average_blanks()
if blanks:
co2_blanks, furnace_blanks = blanks
average_co2_blanks = 'Average blanks for CO<sub>2</sub>: ({Ar40:0.3f}, {Ar39:0.3f}, {Ar38:0.3f}, ' \
'{Ar37:0.3f}, {Ar36:0.3f}), ' \
'x10<sup>-{sens_exp:}</sup> ' \
'for Ar<super>40</super>, Ar<super>39</super>, ' \
'Ar<super>38</super>, Ar<super>37</super>, Ar<super>36</super> ' \
'respectively'.format(**co2_blanks)
crow = FooterRow(fontsize=6, height=height)
crow.add_item(span=-1, value=self._new_paragraph(average_co2_blanks))
data.append(crow)
def factory(f):
r = FootNoteRow(fontsize=6, height=height)
r.add_item(value=f)
return r
data.extend([factory(fi) for fi in self._footnotes])
# _get_idxs = lambda x: self._get_idxs(rows, x)
_get_se = lambda x: (x[0][0], x[-1][0])
# set for footnot rows
footnote_idxs = self._get_idxs(data, FootNoteRow)
sidx, eidx = _get_se(footnote_idxs)
style.add('VALIGN', (0, sidx), (-1, eidx), 'MIDDLE')
for idx, _v in footnote_idxs:
style.add('SPAN', (0, idx), (-1, idx))
# ===============================================================================
# ============= EOF =============================================
# class TableSpec(HasTraits):
# status_width = Int(5)
# id_width = Int(20)
# power_width = Int(30)
# moles_width = Int(50)
#
#
# ar40_width = DefaultInt(value=45)
# ar40_error_width = DefaultInt()
# ar39_width = DefaultInt(value=45)
# ar39_error_width = DefaultInt()
# ar38_width = DefaultInt()
# ar38_error_width = DefaultInt()
# ar37_width = DefaultInt()
# ar37_error_width = DefaultInt()
# ar36_width = DefaultInt()
# ar36_error_width = DefaultInt(value=50)
#def _make_meta(self, analyses, style, include_footnotes=False):
# ref = analyses[0]
# j = ref.j
#
# #ic = ref.ic_factor
# ic = (1, 0)
# sample = ref.sample
# labnumber = ref.labnumber
# material = ref.material
#
# igsn = ''
#
# if not isinstance(j, tuple):
# j = j.nominal_value, j.std_dev
#
# if not isinstance(ic, tuple):
# ic = ic.nominal_value, ic.std_dev
#
# line1 = Row(fontsize=8)
# line1.add_item(value=NamedParameter('Sample', sample), span=5)
# line1.add_item(value=NamedParameter('Lab #', labnumber), span=2)
#
# js = u'{:0.2E} \u00b1{:0.2E}'.format(j[0], j[1])
# line1.add_item(value=NamedParameter('J', js), span=3)
# ics = u'{:0.3f} \u00b1{:0.4f}'.format(ic[0], ic[1])
# if include_footnotes:
# foot = self._make_footnote('IC',
# 'IC Factor',
# 'H1/CDD intercalibration',
# '<b>IC</b>',
# link_extra=u': {}'.format(ics))
# else:
# foot = NamedParameter('IC', ics)
#
# line1.add_item(value=foot, span=3)
#
# line2 = Row(fontsize=8)
# line2.add_item(value=NamedParameter('Material', material), span=5)
# line2.add_item(value=NamedParameter('IGSN', igsn), span=2)
#
# # self._sample_summary_row1 = line1
# # self._sample_summary_row2 = line2
# title = False
# title_row = 0
# sample_row = 0
# if title:
# sample_row += 1
#
# style.add('LINEBELOW', (0, sample_row), (-1, sample_row), 1.5, colors.black)
#
# return [line1, line2]
#def _make_header(self, style):
# sigma = u'\u00b1 1\u03c3'
# # sigma = self._plusminus_sigma()
# super_ar = lambda x: '{}Ar'.format(Superscript(x))
#
# _102fa = '(10{} fA)'.format(Superscript(2))
# _103fa = '(10{} fA)'.format(Superscript(3))
# minus_102fa = '(10{} fA)'.format(Superscript(-2))
#
# # blank = self._make_footnote('BLANK',
# # 'Blank Type', 'LR= Linear Regression, AVE= Average',
# # 'Blank')
# # blank = 'Blank Type'
# line = [
# ('', ''),
# ('N', ''),
# (self.extract_label, self.extract_units),
# (super_ar(40), ''),
# (super_ar(40), _103fa), (sigma, ''),
# (super_ar(39), _103fa), (sigma, ''),
# (super_ar(38), ''), (sigma, ''),
# (super_ar(37), ''), (sigma, ''),
# (super_ar(36), ''), (sigma, minus_102fa),
# ('%{}*'.format(super_ar(40)), ''),
# ('{}*/{}{}'.format(super_ar(40),
# super_ar(39),
# Subscript('K')), ''),
# ('Age', '(Ma)'), (sigma, ''),
# ('K/Ca', ''),
# (sigma, ''),
# # (blank, 'type'),
# # (super_ar(40), ''), (sigma, ''),
# # (super_ar(39), ''), (sigma, ''),
# # (super_ar(38), ''), (sigma, ''),
# # (super_ar(37), ''), (sigma, ''),
# # (super_ar(36), ''), (sigma, ''),
# ]
#
# name_row, unit_row = zip(*line)
#
# default_fontsize = 8
# nrow = Row(fontsize=default_fontsize)
# for i, ni in enumerate(name_row):
# nrow.add_item(value=ni)
#
# default_fontsize = 7
# urow = Row(fontsize=default_fontsize)
# for ni in unit_row:
# urow.add_item(value=ni)
#
# name_row_idx = 2
# unit_row_idx = 3
# # set style for name header
# style.add('LINEABOVE', (0, name_row_idx),
# (-1, name_row_idx), 1.5, colors.black)
#
# # set style for unit header
# style.add('LINEBELOW', (0, unit_row_idx),
# (-1, unit_row_idx), 1.5, colors.black)
#
# return [
# nrow,
# urow
# ]
def _make_footer_rows(self, data, style):
rows = []
df = 6
height = self.footnote_height
for v in ('<b>Constants used</b>', '<b>Atmospheric argon ratios</b>'):
row = FooterRow(fontsize=df, height=height)
row.add_item(value=v, span=-1)
rows.append(row)
for i in range(18):
row.add_item(value='')
ref = self._ref
arar_constants = ref.arar_constants
for n, d, key in ((40, 36, 'atm4036'),
(40, 38, 'atm4038')):
row = FooterRow(fontsize=df, height=height)
row.add_item(value='({}Ar/{}Ar){}'.format(
Superscript(n),
Superscript(d),
Subscript('A')),
span=3)
vv = getattr(arar_constants, key)
v, e = floatfmt(vv.nominal_value, n=1), floatfmt(vv.std_dev, n=1)
cite_key = '{}_citation'.format(key)
r = getattr(arar_constants, cite_key)
row.add_item(value=u'{} \u00b1{}'.format(v, e),
span=2)
row.add_item(value=r, span=-1)
rows.append(row)
row = FooterRow(fontsize=df, height=height)
row.add_item(value='<b>Interferring isotope production ratios</b>', span=-1)
rows.append(row)
for n, d, s, key in (
(40, 39, 'K', 'k4039'),
(38, 39, 'K', 'k3839'),
(37, 39, 'K', 'k3739'),
(39, 37, 'Ca', 'ca3937'),
(38, 37, 'Ca', 'ca3837'),
(36, 37, 'Ca', 'ca3637')):
row = FooterRow(fontsize=df, height=height)
row.add_item(value='({}Ar/{}Ar){}'.format(
Superscript(n),
Superscript(d),
Subscript(s)),
span=3)
vv = ref.interference_corrections[key]
v, e = floatfmt(vv.nominal_value, use_scientific=True), floatfmt(vv.std_dev, use_scientific=True)
row.add_item(value=u'{} \u00b1{}'.format(v, e),
span=2)
rows.append(row)
row = FooterRow(fontsize=df, height=height)
row.add_item(value='<b>Decay constants</b>', span=-1)
rows.append(row)
for i, E, dl, key in (
(40, 'K', u'\u03BB\u03B5', 'lambda_b'),
(40, 'K', u'\u03BB\u03B2', 'lambda_e'),
(39, 'Ar', '', 'lambda_Ar39'),
(37, 'Ar', '', 'lambda_Ar37')):
vv = getattr(arar_constants, key)
v, e = floatfmt(vv.nominal_value, use_scientific=True), floatfmt(vv.std_dev, use_scientific=True)
cite_key = '{}_citation'.format(key)
r = getattr(arar_constants, cite_key)
row = FooterRow(fontsize=df, height=height)
row.add_item(value=u'{}{} {}'.format(Superscript(i), E, dl), span=3)
row.add_item(value=u'{} \u00b1{} a{}'.format(v, e, Superscript(-1)), span=3)
row.add_item(value=r, span=-1)
rows.append(row)
data.extend(rows)
_get_idxs = lambda x: self._get_idxs(data, x)
_get_se = lambda x: (x[0][0], x[-1][0])
footer_idxs = _get_idxs(FooterRow)
sidx, eidx = _get_se(footer_idxs)
style.add('VALIGN', (0, sidx), (-1, eidx), 'MIDDLE')
return rows
def _make_footer_rows(self, data, style):
rows = []
df = 6
for v in ('<b>Constants used</b>', '<b>Atmospheric argon ratios</b>'):
row = FooterRow(fontsize=df)
row.add_item(value=v, span=-1)
rows.append(row)
for i in range(19):
row.add_item(value='')
for n, d, v, e, r in (
(40, 36, 295.5, 0.5, 'Nier (1950)'),
(40, 38, 0.1880, 0.5, 'Nier (1950)'),
):
row = FooterRow(fontsize=df)
row.add_item(value='({}Ar/{}Ar){}'.format(
Superscript(n),
Superscript(d),
Subscript('A'),
),
span=3
)
row.add_item(value=u'{} \u00b1{}'.format(v, e),
span=2)
row.add_item(value=r, span=-1)
rows.append(row)
# row.add_item(value='')
# rows.append(row)
row = FooterRow(fontsize=df)
row.add_item(value='<b>Interferring isotope production ratios</b>', span=-1)
rows.append(row)
for n, d, s, v, e, r in (
(40, 39, 'K', 295.5, 0.5, 'Nier (1950)'),
(38, 39, 'K', 0.1880, 0.5, 'Nier (1950)'),
(37, 39, 'K', 0.1880, 0.5, 'Nier (1950)'),
(39, 37, 'Ca', 295.5, 0.5, 'Nier (1950)'),
(38, 37, 'Ca', 0.1880, 0.5, 'Nier (1950)'),
(36, 37, 'Ca', 0.1880, 0.5, 'Nier (1950)'),
):
row = FooterRow(fontsize=df)
row.add_item(value='({}Ar/{}Ar){}'.format(
Superscript(n),
Superscript(d),
Subscript(s),
),
span=3
)
row.add_item(value=u'{} \u00b1{}'.format(v, e),
span=2)
row.add_item(value=r, span=-1)
rows.append(row)
row = FooterRow(fontsize=df)
row.add_item(value='<b>Decay constants</b>', span=-1)
rows.append(row)
for i, E, dl, v, e, r in (
(40, 'K', u'\u03BB\u03B5', 1, 0, 'Foo (1990)'),
(40, 'K', u'\u03BB\u03B2', 1, 0, 'Foo (1990)'),
(39, 'Ar', '', 1, 0, 'Foo (1990)'),
(37, 'Ar', '', 1, 0, 'Foo (1990)'),
):
row = FooterRow(fontsize=df)
row.add_item(value=u'{}{} {}'.format(Superscript(i), E, dl), span=3)
row.add_item(value=u'{} \u00b1{} a{}'.format(v, e, Superscript(-1)), span=2)
row.add_item(value=r, span=-1)
rows.append(row)
data.extend(rows)
_get_idxs = lambda x: self._get_idxs(data, x)
_get_se = lambda x: (x[0][0], x[-1][0])
footer_idxs = _get_idxs(FooterRow)
sidx, eidx = _get_se(footer_idxs)
style.add('VALIGN', (0, sidx), (-1, eidx), 'MIDDLE')
# for idx, v in footer_idxs:
# for si, se in v.spans:
# style.add('SPAN', (si, idx), (se, idx))
return rows
#===============================================================================
#
#===============================================================================
#============= EOF =============================================
# class TableSpec(HasTraits):
# status_width = Int(5)
# id_width = Int(20)
# power_width = Int(30)
# moles_width = Int(50)
#
#
# ar40_width = DefaultInt(value=45)
# ar40_error_width = DefaultInt()
# ar39_width = DefaultInt(value=45)
# ar39_error_width = DefaultInt()
# ar38_width = DefaultInt()
# ar38_error_width = DefaultInt()
# ar37_width = DefaultInt()
# ar37_error_width = DefaultInt()
# ar36_width = DefaultInt()
# ar36_error_width = DefaultInt(value=50)
#def _make_meta(self, analyses, style, include_footnotes=False):
# ref = analyses[0]
# j = ref.j
#
# #ic = ref.ic_factor
# ic = (1, 0)
# sample = ref.sample
# labnumber = ref.labnumber
# material = ref.material
#
# igsn = ''
#
# if not isinstance(j, tuple):
# j = j.nominal_value, j.std_dev
#
# if not isinstance(ic, tuple):
# ic = ic.nominal_value, ic.std_dev
#
# line1 = Row(fontsize=8)
# line1.add_item(value=NamedParameter('Sample', sample), span=5)
# line1.add_item(value=NamedParameter('Lab #', labnumber), span=2)
#
# js = u'{:0.2E} \u00b1{:0.2E}'.format(j[0], j[1])
# line1.add_item(value=NamedParameter('J', js), span=3)
# ics = u'{:0.3f} \u00b1{:0.4f}'.format(ic[0], ic[1])
# if include_footnotes:
# foot = self._make_footnote('IC',
# 'IC Factor',
# 'H1/CDD intercalibration',
# '<b>IC</b>',
# link_extra=u': {}'.format(ics))
# else:
# foot = NamedParameter('IC', ics)
#
# line1.add_item(value=foot, span=3)
#
# line2 = Row(fontsize=8)
# line2.add_item(value=NamedParameter('Material', material), span=5)
# line2.add_item(value=NamedParameter('IGSN', igsn), span=2)
#
# # self._sample_summary_row1 = line1
# # self._sample_summary_row2 = line2
# title = False
# title_row = 0
# sample_row = 0
# if title:
# sample_row += 1
#
# style.add('LINEBELOW', (0, sample_row), (-1, sample_row), 1.5, colors.black)
#
# return [line1, line2]
#def _make_header(self, style):
# sigma = u'\u00b1 1\u03c3'
# # sigma = self._plusminus_sigma()
# super_ar = lambda x: '{}Ar'.format(Superscript(x))
#
# _102fa = '(10{} fA)'.format(Superscript(2))
# _103fa = '(10{} fA)'.format(Superscript(3))
# minus_102fa = '(10{} fA)'.format(Superscript(-2))
#
# # blank = self._make_footnote('BLANK',
# # 'Blank Type', 'LR= Linear Regression, AVE= Average',
# # 'Blank')
# # blank = 'Blank Type'
# line = [
# ('', ''),
# ('N', ''),
# (self.extract_label, self.extract_units),
# (super_ar(40), ''),
# (super_ar(40), _103fa), (sigma, ''),
# (super_ar(39), _103fa), (sigma, ''),
# (super_ar(38), ''), (sigma, ''),
# (super_ar(37), ''), (sigma, ''),
# (super_ar(36), ''), (sigma, minus_102fa),
# ('%{}*'.format(super_ar(40)), ''),
# ('{}*/{}{}'.format(super_ar(40),
# super_ar(39),
# Subscript('K')), ''),
# ('Age', '(Ma)'), (sigma, ''),
# ('K/Ca', ''),
# (sigma, ''),
# # (blank, 'type'),
# # (super_ar(40), ''), (sigma, ''),
# # (super_ar(39), ''), (sigma, ''),
# # (super_ar(38), ''), (sigma, ''),
# # (super_ar(37), ''), (sigma, ''),
# # (super_ar(36), ''), (sigma, ''),
# ]
#
# name_row, unit_row = zip(*line)
#
# default_fontsize = 8
# nrow = Row(fontsize=default_fontsize)
# for i, ni in enumerate(name_row):
# nrow.add_item(value=ni)
#
# default_fontsize = 7
# urow = Row(fontsize=default_fontsize)
# for ni in unit_row:
# urow.add_item(value=ni)
#
# name_row_idx = 2
# unit_row_idx = 3
# # set style for name header
# style.add('LINEABOVE', (0, name_row_idx),
# (-1, name_row_idx), 1.5, colors.black)
#
# # set style for unit header
# style.add('LINEBELOW', (0, unit_row_idx),
# (-1, unit_row_idx), 1.5, colors.black)
#
# return [
# nrow,
# urow
# ]
def _make_footnote_table(self):
style = self._new_style(debug_grid=False)
style.add('BACKGROUND', (0, 0), (-1, -1), colors.lightgrey)
l = ', '.join(['{}= {}'.format(k, v) for k, v in rock_type_map.items()[:5]])
l2 = ', '.join(['{}= {}'.format(k, v) for k, v in rock_type_map.items()[5:9]])
l3 = ', '.join(['{}= {}'.format(k, v) for k, v in rock_type_map.items()[9:]])
r = FooterRow(fontsize=7)
r.add_item(value='Rock Types: {}'.format(l), span=7)
r2 = FooterRow(fontsize=7)
r2.add_blank_item(1)
r2.add_item(value=l2, span=6)
r3 = FooterRow(fontsize=7)
r3.add_blank_item(1)
r3.add_item(value=l3, span=6)
r4 = FooterRow(fontsize=7)
r4.add_item(value='Materials: GMC= Groundmass Concentrate', span=7)
fdata = [r, r2, r3, r4]
ft = self._new_table(style, fdata)
return ft
def _make_footnote_table(self):
style = self._new_style(debug_grid=False)
style.add('BACKGROUND', (0, 0), (-1, -1), colors.lightgrey)
l = ', '.join(['{}= {}'.format(k, v) for k, v in rock_type_map.items()[:5]])
l2 = ', '.join(['{}= {}'.format(k, v) for k, v in rock_type_map.items()[5:9]])
l3 = ', '.join(['{}= {}'.format(k, v) for k, v in rock_type_map.items()[9:]])
r = FooterRow(fontsize=7)
r.add_item(value='Rock Types: {}'.format(l), span=7)
r2 = FooterRow(fontsize=7)
r2.add_blank_item(1)
r2.add_item(value=l2, span=6)
r3 = FooterRow(fontsize=7)
r3.add_blank_item(1)
r3.add_item(value=l3, span=6)
r4 = FooterRow(fontsize=7)
r4.add_item(value='Materials: GMC= Groundmass Concentrate', span=7)
fdata = [r, r2, r3, r4]
ft = self._new_table(style, fdata)
return ft
