def __init__(self, **keywords): """ 2008-03-11 """ from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) #argument dictionary self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
def __init__(self, **keywords): from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self) self._threadlocal = threading.local() self.tables = {} self.mappers = {} self._engine = None
def __init__(self, **keywords): """ 2008-04-08 """ from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) #argument dictionary self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
def __init__(self, **keywords): from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self) self._threadlocal = threading.local() self.tables = {} self.mappers = {} self._engine = None
def __init__(self, **keywords): """ 2008-04-12 add experimenter, mapping_file 2008-04-09 array_data_table, probes_table, strain_info_table are no longer required. but leave them in the argument_default_dict. 2008-02-28 """ from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict """ #2008-04-23 old dictionary argument_default_dict = {('hostname',1, ):'papaya.usc.edu',\ ('dbname',1, ):'stock_250k',\ ('user',1, ):None,\ ('passwd',1, ):None,\ ('experimenter',0,):None,\ ('mapping_file',1,):None,\ ('input_dir',1, ):None,\ ('output_dir',1, ):'/Network/Data/250k/db/raw_data/',\ ('array_data_table',0, ):'array_data',\ ('probes_table',0, ):'probes',\ ('strain_info_table',0, ):'strain_info',\ ('array_info_table',1, ):'array_info',\ ('commit',0, int):0,\ ('debug',0, int):0,\ ('report',0, int):0} """ argument_default_dict = turn_option_default_dict2argument_default_dict( self.option_default_dict) """ 2008-02-28 argument_default_dict is a dictionary of default arguments the key is a tuple, ('argument_name', is_argument_required, argument_type) argument_type is optional """ #argument dictionary self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
def __init__(self, **keywords): """ 2008-04-12 add experimenter, mapping_file 2008-04-09 array_data_table, probes_table, strain_info_table are no longer required. but leave them in the argument_default_dict. 2008-02-28 """ from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict """ #2008-04-23 old dictionary argument_default_dict = {('hostname',1, ):'papaya.usc.edu',\ ('dbname',1, ):'stock_250k',\ ('user',1, ):None,\ ('passwd',1, ):None,\ ('experimenter',0,):None,\ ('mapping_file',1,):None,\ ('input_dir',1, ):None,\ ('output_dir',1, ):'/Network/Data/250k/db/raw_data/',\ ('array_data_table',0, ):'array_data',\ ('probes_table',0, ):'probes',\ ('strain_info_table',0, ):'strain_info',\ ('array_info_table',1, ):'array_info',\ ('commit',0, int):0,\ ('debug',0, int):0,\ ('report',0, int):0} """ argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) """ 2008-02-28 argument_default_dict is a dictionary of default arguments the key is a tuple, ('argument_name', is_argument_required, argument_type) argument_type is optional """ #argument dictionary self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)