def __init__(self, **keywords): """ 2008-03-11 """ from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) #argument dictionary self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
def __init__(self, **keywords):
from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict
argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict)
self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
self._threadlocal = threading.local()
self.tables = {}
self.mappers = {}
self._engine = None
def __init__(self, **keywords): """ 2008-04-08 """ from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict) #argument dictionary self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
def __init__(self, **keywords):
from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict
argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict)
self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
self._threadlocal = threading.local()
self.tables = {}
self.mappers = {}
self._engine = None
def __init__(self, **keywords):
"""
2008-04-12
add experimenter, mapping_file
2008-04-09
array_data_table, probes_table, strain_info_table are no longer required. but leave them in the argument_default_dict.
2008-02-28
"""
from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict
"""
#2008-04-23 old dictionary
argument_default_dict = {('hostname',1, ):'papaya.usc.edu',\
('dbname',1, ):'stock_250k',\
('user',1, ):None,\
('passwd',1, ):None,\
('experimenter',0,):None,\
('mapping_file',1,):None,\
('input_dir',1, ):None,\
('output_dir',1, ):'/Network/Data/250k/db/raw_data/',\
('array_data_table',0, ):'array_data',\
('probes_table',0, ):'probes',\
('strain_info_table',0, ):'strain_info',\
('array_info_table',1, ):'array_info',\
('commit',0, int):0,\
('debug',0, int):0,\
('report',0, int):0}
"""
argument_default_dict = turn_option_default_dict2argument_default_dict(
self.option_default_dict)
"""
2008-02-28
argument_default_dict is a dictionary of default arguments
the key is a tuple, ('argument_name', is_argument_required, argument_type)
argument_type is optional
"""
#argument dictionary
self.ad = process_function_arguments(keywords,
argument_default_dict,
error_doc=self.__doc__,
class_to_have_attr=self)
def __init__(self, **keywords):
"""
2008-04-12
add experimenter, mapping_file
2008-04-09
array_data_table, probes_table, strain_info_table are no longer required. but leave them in the argument_default_dict.
2008-02-28
"""
from pymodule import process_function_arguments, turn_option_default_dict2argument_default_dict
"""
#2008-04-23 old dictionary
argument_default_dict = {('hostname',1, ):'papaya.usc.edu',\
('dbname',1, ):'stock_250k',\
('user',1, ):None,\
('passwd',1, ):None,\
('experimenter',0,):None,\
('mapping_file',1,):None,\
('input_dir',1, ):None,\
('output_dir',1, ):'/Network/Data/250k/db/raw_data/',\
('array_data_table',0, ):'array_data',\
('probes_table',0, ):'probes',\
('strain_info_table',0, ):'strain_info',\
('array_info_table',1, ):'array_info',\
('commit',0, int):0,\
('debug',0, int):0,\
('report',0, int):0}
"""
argument_default_dict = turn_option_default_dict2argument_default_dict(self.option_default_dict)
"""
2008-02-28
argument_default_dict is a dictionary of default arguments
the key is a tuple, ('argument_name', is_argument_required, argument_type)
argument_type is optional
"""
#argument dictionary
self.ad = process_function_arguments(keywords, argument_default_dict, error_doc=self.__doc__, class_to_have_attr=self)
