def test_merge_taxa(self): # this test calls the public API directly d1 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f2']) d2 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f3']) obs = merge_taxa([d1, d2]) exp = pd.Series(['a;b;c;d', 'a;b;c;e', 'a;b;c;e'], index=['f1', 'f2', 'f3']) pdt.assert_series_equal(obs, exp)
def test_merge_taxa(self): # this test calls the public API directly d1 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f2']) d2 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f3']) obs = merge_taxa([d1, d2]) exp = pd.Series(['a;b;c;d', 'a;b;c;e', 'a;b;c;e'], index=['f1', 'f2', 'f3']) pdt.assert_series_equal(obs, exp)
def test_merge_taxa(self): # this test calls the public API directly d1 = pd.DataFrame([('a;b;c;d', '1.0'), ('a;b;c;f', '0.7')], index=['f1', 'f2'], columns=['Taxon', 'Confidence']) d2 = pd.DataFrame([('1.0', 'a;b;c;g'), ('1.0', 'a;b;c;e')], index=['f1', 'f3'], columns=['Confidence', 'Taxon']) obs = merge_taxa([d1, d2]) exp = pd.DataFrame( [('a;b;c;d', '1.0'), ('a;b;c;f', '0.7'), ('a;b;c;e', '1.0')], index=['f1', 'f2', 'f3'], columns=['Taxon', 'Confidence']) pdt.assert_frame_equal(obs, exp)