def test_merge_taxa(self):
# this test calls the public API directly
d1 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f2'])
d2 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f3'])
obs = merge_taxa([d1, d2])
exp = pd.Series(['a;b;c;d', 'a;b;c;e', 'a;b;c;e'],
index=['f1', 'f2', 'f3'])
pdt.assert_series_equal(obs, exp)
def test_merge_taxa(self):
# this test calls the public API directly
d1 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f2'])
d2 = pd.Series(['a;b;c;d', 'a;b;c;e'], index=['f1', 'f3'])
obs = merge_taxa([d1, d2])
exp = pd.Series(['a;b;c;d', 'a;b;c;e', 'a;b;c;e'],
index=['f1', 'f2', 'f3'])
pdt.assert_series_equal(obs, exp)
def test_merge_taxa(self):
# this test calls the public API directly
d1 = pd.DataFrame([('a;b;c;d', '1.0'), ('a;b;c;f', '0.7')],
index=['f1', 'f2'], columns=['Taxon', 'Confidence'])
d2 = pd.DataFrame([('1.0', 'a;b;c;g'), ('1.0', 'a;b;c;e')],
index=['f1', 'f3'], columns=['Confidence', 'Taxon'])
obs = merge_taxa([d1, d2])
exp = pd.DataFrame(
[('a;b;c;d', '1.0'), ('a;b;c;f', '0.7'), ('a;b;c;e', '1.0')],
index=['f1', 'f2', 'f3'], columns=['Taxon', 'Confidence'])
pdt.assert_frame_equal(obs, exp)