def _plot1D_numpy(self, data, bins, weights=None, option='', **kwargs):
""" ... """
# Check(s)
if bins is None:
warning(
"You need to specify 'bins' when plotting a numpy-type input.")
return
if len(data) != len(bins) and len(bins) < 2:
warning("Number of bins {} is not accepted".format(len(bins)))
return
# Fill histogram
if len(data) == len(bins):
# Assuming 'data' and 'bins' are sets of (x,y)-points
h = ROOT.TGraph(len(bins), np.array(bins, dtype=np.float),
np.array(data, dtype=np.float))
else:
h = ROOT.TH1F('h_{:d}'.format(int(time.time() * 1E+06)), "",
len(bins) - 1, np.array(bins, dtype=np.float))
if len(data) == len(bins) - 1:
# Assuming 'data' are bin values
array2hist(data, h)
else:
# Assuming 'data' are values to be filled
fill_hist(h, data, weights=weights)
pass
pass
# Plot histogram
return self._plot1D(h, option, **kwargs)
def main():
args = get_args()
urhfile = uproot.open(args.histogramfile)
rrfile = ROOT.TFile.Open(args.outfile, "RECREATE")
rrfile.cd()
regions = args.regions
if regions == ["_all"]:
regions = DEFAULT_REGIONS
for region in regions:
keepers = get_keepers(urhfile, region, target=args.target)
print(f"{region}:\t {keepers}")
for k in urhfile.keys():
key = k.decode('utf-8')
if ";" in key:
key = key.split(";")[0]
if region in key:
urhist = urhfile.get(key)
count = urhist.values
sumw2 = urhist.variances
countkeep = np.zeros((keepers.shape[0] + 2))
sumw2keep = np.zeros((keepers.shape[0] + 2))
countkeep[1:-1] = count[keepers]
sumw2keep[1:-1] = sumw2[keepers]
rrhist = ROOT.TH1D(key, key, len(keepers), 0, 1)
array2hist(countkeep, rrhist, np.sqrt(sumw2keep))
rrhist.Write("", ROOT.TObject.kOverwrite)
rrhist.SetDirectory(0)
rrfile.Close()
def toRoot(self, name, labels = "", xRescale = 1, yRescale = 1):
# If there's a second dimension, create a TH2.
if self.heights.ndim == 2:
histogram = root.TH2F(
name,
labels,
len(self.xCenters),
self.xEdges[0] * xRescale,
self.xEdges[-1] * xRescale,
len(self.yCenters),
self.yEdges[0] * yRescale,
self.yEdges[-1] * yRescale
)
# If there's no second dimension, create a TH1.
else:
histogram = root.TH1F(
name,
labels,
len(self.xCenters),
self.xEdges[0] * xRescale,
self.xEdges[-1] * xRescale
)
# Copy the bin contents and update the number of entries.
rnp.array2hist(self.heights, histogram)
histogram.ResetStats()
return histogram
def __init__(self, working_points, functions, efficiency_map):
efficiency_array = hist2array(efficiency_map)
working_points_indices = find_closest(working_points, efficiency_array)
self.function_index_map = efficiency_map.empty_clone()
array2hist(working_points_indices, self.function_index_map)
self.indices = working_points_indices
self.functions = functions
self.dim = len(efficiency_array.shape)
def fold_hist(hist, fold):
tmp = hist
name = tmp.GetName()
tmp.SetName('tmp')
hist = ROOT.TH1D(name, '', len(fold), 0., float(len(fold)))
hist.Sumw2()
indices = np.array(fold)
arr = np.sum(rnp.hist2array(tmp, copy=False)[indices], axis=1)
tmp.Delete()
rnp.array2hist(arr, hist)
return hist
def numpy_to_TH2(np_arr,name,th3):
'''
converts 2D-numpy array with info of original TH3 into a TH2D histogram.
'''
np_arr_clean = np.where(np_arr<0,0,np_arr)
from root_numpy import array2hist
# The x bins here are hard coded just to make them comparable to annas old plots.
# th2 = ROOT.TH2D(name,name,90,th3.xlow,-1,th3.ynumbins,th3.ylow,th3.yhigh)
# array2hist(np_arr_clean[:-10,:],th2)
th2 = ROOT.TH2D(name,name,th3.xnumbins,np.append(th3.bins[0][:-1,0],th3.bins[0][-1]),th3.ynumbins,np.append(th3.bins[1][:-1,0],th3.bins[1][-1]))
array2hist(np_arr_clean,th2)
return th2
def matrix_to_hist2d( value_matrix, x_edges, y_edges ):
'''
numpy matrix of values and bin edges -> Hist2D
'''
from root_numpy import array2hist
rootpy_hist = Hist2D( x_edges, y_edges, type = 'D' )
array2hist(value_matrix, rootpy_hist)
# set_bin_value = rootpy_hist.SetBinContent
# for x in range(0, len(x_edges)-1):
# for y in range(0, len(y_edges)-1):
# set_bin_value( x+1, y+1, value_matrix.item(y, x) )
return rootpy_hist
def convert_to_th1d(in_map, errors=False):
assert isinstance(in_map, Map)
name = in_map.name
assert len(in_map.shape) == 1
n_bins = in_map.shape[0]
edges = in_map.binning.bin_edges[0].m
th1d = TH1D(name, name, n_bins, edges)
array2hist(unp.nominal_values(in_map.hist), th1d)
if errors:
map_errors = unp.std_devs(in_map.hist)
for idx in xrange(n_bins):
th1d.SetBinError(idx+1, map_errors[idx])
return th1d
def convert_to_th2d(in_map, errors=False):
assert isinstance(in_map, Map)
name = in_map.name
n_bins = in_map.shape
assert len(n_bins) == 2
nbins_a, nbins_b = n_bins
edges_a, edges_b = [b.m for b in in_map.binning.bin_edges]
th2d = TH2D(name, name, nbins_a, edges_a, nbins_b, edges_b)
array2hist(unp.nominal_values(in_map.hist), th2d)
if errors:
map_errors = unp.std_devs(in_map.hist)
for x_idx, y_idx in product(*map(range, n_bins)):
th2d.SetBinError(x_idx+1, y_idx+1, map_errors[x_idx][y_idx])
return th2d
def hist2root(h, name=None, title=''):
""" Convert your histograms to a root histogram.. if you really want to
Args:
h: array with the histogram h=(y_values, bin_edges, (patches=optional))
name: Name for the root histogram, optional
title: Title for the root histogram, optional
Returns:
TH1F or TH2F depending on the input array
Examples:
>>> data = [1,2,3,4,5,6,7]
>>> h = b2plot.hist(data)
>>> from b2plot.helpers import hist2root
>>> root_hist = hist2root(h)
"""
import root_numpy
import random
import ROOT
y_values = h[0]
name = "".join(random.choice("fck_root_wtf")
for _ in range(5)) if name is None else name
if len(h) > 3:
rh = ROOT.TH2F(name, title, len(h[1]) - 1, h[1], len(h[2]) - 1, h[2])
else:
rh = ROOT.TH1F(name, title, len(h[1]) - 1, h[1])
return root_numpy.array2hist(y_values, rh)
def get_cdf (h):
"""
Returns the cumulative distribution of `hist`.
"""
# Prepare array(s)
y = root_numpy.hist2array(h)
# Compute CDF
cdf = np.cumsum(y)
# Convert to ROOT.TH1F
hcdf = h.Clone("%s_CDF" % h.GetName())
root_numpy.array2hist(cdf, hcdf)
return hcdf
def main(args, options):
if len(args) < 1:
print('syntax: python3 his2root.py <his file> [options]')
sys.exit(1)
his_files = args[0:]
print("Will convert HIS files: ", his_files)
for his_file in his_files:
print("\t===> Converting HIS file: ", his_file)
stem, _ = os.path.splitext(his_file)
his = openHIS(his_file)
outname = stem + '.root' if not options.outfile else options.outfile
rf = ROOT.TFile(outname, 'recreate')
runN = stem.split('run')[-1]
run = runN if len(runN) else 'XXXX'
for idx, section in enumerate(his):
if options.maxEntries > -1 and idx >= options.maxEntries:
break
print("transferring image ", idx)
(nx, ny) = section.shape
title = stem + ('_%04d' % idx)
postfix = 'run{run}_ev{ev}'.format(run=run, ev=idx)
title = 'pic_{pfx}'.format(pfx=postfix)
h2 = ROOT.TH2S(title, title, nx, 0, nx, ny, 0, ny)
h2.GetXaxis().SetTitle('x')
h2.GetYaxis().SetTitle('y')
_ = array2hist(np.fliplr(np.transpose(section)), h2)
h2.Write()
rf.Close()
def get_css_fns(shapeval, omega, originalHist, name):
"""
...
"""
# Compute $F_{CSS}( x | \alpha, \Omega_{D} )$
Fcss = originalHist.Clone("Fcss_%s_%.2f_%.2f_clone" %
(name, omega, shapeval))
alpha = shapeval
x = np.array(
map(Fcss.GetXaxis().GetBinCenter, range(1,
Fcss.GetNbinsX() + 1)))
y = np.power(alpha / omega, alpha) / gamma(x) * np.power(
x, alpha - 1) * np.exp(-alpha * x / omega)
root_numpy.array2hist(y, Fcss)
# Now, let's do some convolving!
jssVar_conv = get_convolution(originalHist, Fcss)
normalise(jssVar_conv)
normalise(originalHist)
# Make the CDFs
jssVar_CDF = get_cdf(originalHist)
jssVar_conv_CDF = get_cdf(jssVar_conv)
# Let F = CDF of original function and G = CDF of convolution
# Then, our map shoud be G^{-1}(F(X)) (http://math.arizona.edu/~jwatkins/f-transform.pdf page 3)
fxvals = jssVar_CDF.GetXaxis().GetXbins()
fyvals = []
ginvxvals = []
ginvyvals = jssVar_CDF.GetXaxis().GetXbins()
for i in range(1, jssVar_CDF.GetNbinsX() + 1):
fyvals += [jssVar_CDF.GetBinContent(i)]
ginvxvals += [jssVar_conv_CDF.GetBinContent(i)]
pass
# Cumulative distribution of jssVar for low mass bin
F = ROOT.TGraph(len(fxvals), np.array(fxvals), np.array(fyvals))
Ginv = ROOT.TGraph(len(ginvxvals), np.array(ginvxvals),
np.array(ginvyvals))
return F, Ginv
def Interpolate(self, *args, **kwargs):
r"""Replace zero valued data points by interpolating between all non-zero data
point of the grid if no arguments are given. Otherwise the standard
:func:`ROOT.TH2.Interpolate` functionality is used.
In the former case the :py:mod:`scipy`'s :func:`interpolate.griddata` function
is used.
:param \*args: See :py:mod:`ROOT` documentation of :func:`ROOT.TH2.Interpolate`
:param \**kwargs: see below
:Keyword Arguments:
* **method** (``str``) -- method of interpolation (default: 'cubic')
* **nearest**: return the value at the data point closest to the point
of interpolation
* **linear**: tessellate the input point set to n-dimensional simplices,
and interpolate linearly on each simplex
* **cubic**: return the value determined from a piecewise cubic,
continuously differentiable and approximately curvature-minimizing
polynomial surface
"""
if len(args) == 0:
# https://stackoverflow.com/a/39596856/10986034
method = kwargs.pop("method", "cubic")
array = rnp.hist2array(self, include_overflow=True)
array[array == 0] = np.nan
x = np.arange(0, array.shape[1])
y = np.arange(0, array.shape[0])
array = np.ma.masked_invalid(array)
xx, yy = np.meshgrid(x, y)
x1 = xx[~array.mask]
y1 = yy[~array.mask]
newarr = array[~array.mask]
GD1 = interpolate.griddata(
(x1, y1), newarr.ravel(), (xx, yy), method=method, fill_value=0.0
)
rnp.array2hist(GD1, self)
else:
super(Histo2D, self).Interpolate(*args)
def get_convolution (h, Fcss):
"""
Returns the convolution of `h` and `Fcss`.
"""
# Check(s)
N = Fcss.GetNbinsX()
assert N == h.GetNbinsX()
# Prepare array(s)
f1 = root_numpy.hist2array(h)
f2 = root_numpy.hist2array(Fcss)
# Perform convolution
conv = np.convolve(f1, f2)[:N]
# Convert to ROOT.TH1F
hconv = h.Clone("%s_conv" % h.GetName())
root_numpy.array2hist(conv, hconv)
return hconv
def check_array2hist(hist):
shape = np.array([hist.GetNbinsX(), hist.GetNbinsY(), hist.GetNbinsZ()])
shape = shape[:hist.GetDimension()]
arr = RNG.randint(0, 10, size=shape)
rnp.array2hist(arr, hist)
arr_hist = rnp.hist2array(hist)
assert_array_equal(arr_hist, arr)
shape_overflow = shape + 2
arr_overflow = RNG.randint(0, 10, size=shape_overflow)
hist_overflow = hist.Clone()
hist_overflow.Reset()
rnp.array2hist(arr_overflow, hist_overflow)
arr_hist_overflow = rnp.hist2array(hist_overflow, include_overflow=True)
assert_array_equal(arr_hist_overflow, arr_overflow)
if len(shape) == 1:
return
# overflow not specified on all axes
arr_overflow2 = arr_overflow[1:-1]
hist_overflow2 = hist.Clone()
hist_overflow2.Reset()
rnp.array2hist(arr_overflow2, hist_overflow2)
arr_hist_overflow2 = rnp.hist2array(hist_overflow2, include_overflow=True)
assert_array_equal(arr_hist_overflow2[1:-1], arr_overflow2)
def check_array2hist(hist):
shape = np.array([hist.GetNbinsX(), hist.GetNbinsY(), hist.GetNbinsZ()])
shape = shape[:hist.GetDimension()]
arr = RNG.randint(0, 10, size=shape)
rnp.array2hist(arr, hist)
arr_hist = rnp.hist2array(hist)
assert_array_equal(arr_hist, arr)
shape_overflow = shape + 2
arr_overflow = RNG.randint(0, 10, size=shape_overflow)
hist_overflow = hist.Clone()
hist_overflow.Reset()
rnp.array2hist(arr_overflow, hist_overflow)
arr_hist_overflow = rnp.hist2array(hist_overflow, include_overflow=True)
assert_array_equal(arr_hist_overflow, arr_overflow)
if len(shape) == 1:
return
# overflow not specified on all axes
arr_overflow2 = arr_overflow[1:-1]
hist_overflow2 = hist.Clone()
hist_overflow2.Reset()
rnp.array2hist(arr_overflow2, hist_overflow2)
arr_hist_overflow2 = rnp.hist2array(hist_overflow2, include_overflow=True)
assert_array_equal(arr_hist_overflow2[1:-1], arr_overflow2)
def generate_noise(options):
t0 = time.time()
Nclone = options.nimages
run_count = str(options.run).zfill(5)
infolder = ""
infile = "histograms"
outfolder = "/"
ecdf_filename = options.filename
outfile = ROOT.TFile(outfolder + '/' + infile + '_Run' + run_count +
'.root', 'RECREATE') #OUTPUT NAME
print('[Generating simulated images]')
imgs = generateNoiseImage(ecdf_filename, Nclone)
nX = np.shape(imgs)[1]
nY = np.shape(imgs)[2]
print('[Generating ROOT file]')
for entry in range(0, Nclone): #RUNNING ON ENTRIES
final_imgs = ROOT.TH2F('pic_run' + str(run_count) + '_ev' + str(entry),
'', nX, 0, (nX - 1), nY, 0, (nY - 1))
total = imgs[entry, :, :]
array2hist(total, final_imgs)
final_imgs.Write()
print('[Run %d with %d images complete]' % (int(run_count), Nclone))
#run_count+=1
outfile.Close()
t1 = time.time()
print('Generation took %.2f seconds' % (t1 - t0))
return
def check_array2hist(hist):
shape = np.array([hist.GetNbinsX(), hist.GetNbinsY(), hist.GetNbinsZ()])
shape = shape[:hist.GetDimension()]
arr = RNG.randint(0, 10, size=shape)
rnp.array2hist(arr, hist)
arr_hist = rnp.hist2array(hist)
assert_array_equal(arr_hist, arr)
# Check behaviour if errors are supplied
errors = arr * 0.1
_hist = hist.Clone()
_hist.Reset()
rnp.array2hist(arr, _hist, errors=errors)
arr_hist = rnp.hist2array(_hist)
assert_array_equal(arr_hist, arr)
if hist.GetDimension() == 1:
errors_from_hist = np.array([_hist.GetBinError(ix)
for ix in range(1, _hist.GetNbinsX() + 1)])
if hist.GetDimension() == 2:
errors_from_hist = np.array([[_hist.GetBinError(ix, iy)
for iy in range(1, _hist.GetNbinsY() + 1)]
for ix in range(1, _hist.GetNbinsX() + 1)])
if hist.GetDimension() == 3:
errors_from_hist = np.array([[[_hist.GetBinError(ix, iy, iz)
for iz in range(1, _hist.GetNbinsZ() + 1)]
for iy in range(1, _hist.GetNbinsY() + 1)]
for ix in range(1, _hist.GetNbinsX() + 1)])
assert_array_equal(errors, errors_from_hist)
shape_overflow = shape + 2
arr_overflow = RNG.randint(0, 10, size=shape_overflow)
hist_overflow = hist.Clone()
hist_overflow.Reset()
rnp.array2hist(arr_overflow, hist_overflow)
arr_hist_overflow = rnp.hist2array(hist_overflow, include_overflow=True)
assert_array_equal(arr_hist_overflow, arr_overflow)
if len(shape) == 1:
return
# overflow not specified on all axes
arr_overflow2 = arr_overflow[1:-1]
hist_overflow2 = hist.Clone()
hist_overflow2.Reset()
rnp.array2hist(arr_overflow2, hist_overflow2)
arr_hist_overflow2 = rnp.hist2array(hist_overflow2, include_overflow=True)
assert_array_equal(arr_hist_overflow2[1:-1], arr_overflow2)
def save(self, output):
# Save the transform and all axis units in NumPy format.
np.savez(output,
transform=self.signal[self.physical],
**{
axis: self.axes[axis][self.physical]
for axis in self.axes.keys()
})
# Create a ROOT histogram for the frequency distribution.
histogram = root.TH1F("transform", ";Frequency (kHz);Arbitrary Units",
len(self.frequency),
self.frequency[0] - self.df / 2,
self.frequency[-1] + self.df / 2)
# Copy the signal into the histogram.
rnp.array2hist(self.signal, histogram)
# Save the histogram.
name = output.split(".")[0]
outFile = root.TFile(f"{name}.root", "RECREATE")
histogram.Write()
outFile.Close()
def read_h5_write_root(fileH5, fileROOT, option='recreate', htype='i'):
print("file h5 =", fileH5)
image = read_image_h5(fileH5)
tf = ROOT.TFile.Open(fileROOT, option)
(nx, ny) = image.shape
title = os.path.basename(fileH5).split('.')[0]
title = title.replace('-', '_')
h2 = ROOT.TH2I(title, title, nx, 0, nx, ny,
0, ny) if htype == 'i' else ROOT.TH2F(
title, title, nx, 0, nx, ny, 0, ny)
h2.GetXaxis().SetTitle('x')
h2.GetYaxis().SetTitle('y')
_ = array2hist(image, h2)
h2.Write()
tf.Close()
return
def ruttalo(his_file):
stem, _ = os.path.splitext(his_file)
his = openHIS(his_file)
outname = stem + '.root'
rf = ROOT.TFile(outname, 'recreate')
runN = stem.split('run')[-1]
run = runN if len(runN) else 'XXXX'
for idx, section in enumerate(his):
if idx % 5 == 0: print("transferring image ", idx)
(nx, ny) = section.shape
title = stem + ('_%04d' % idx)
postfix = 'run{run}_ev{ev}'.format(run=run, ev=idx)
title = 'pic_{pfx}'.format(pfx=postfix)
h2 = ROOT.TH2S(title, title, nx, 0, nx, ny, 0, ny)
h2.GetXaxis().SetTitle('x')
h2.GetYaxis().SetTitle('y')
_ = array2hist(np.fliplr(np.transpose(section)), h2)
h2.Write()
rf.Close()
return outname, run
def plot_hist(prefit_list, fit_b_list, fit_s_list, hist_name):
print("Processing {}".format(hist_name))
print(prefit_list)
print(fit_b_list)
print(fit_s_list)
canvas = pyr.TCanvas("canvas", "Histogram", 1800, 800)
mountainrange_prefit = pyr.TH1F("mountainrange_prefit", hist_name, len(prefit_list), 0, len(prefit_list))
mountainrange_fit_b = pyr.TH1F("mountainrange_fit_b", hist_name, len(fit_b_list), 0, len(fit_b_list))
mountainrange_fit_s = pyr.TH1F("mountainrange_fit_s", hist_name, len(fit_s_list), 0, len(fit_s_list))
root_numpy.array2hist(prefit_list, mountainrange_prefit)
root_numpy.array2hist(fit_b_list, mountainrange_fit_b)
root_numpy.array2hist(fit_s_list, mountainrange_fit_s)
max_boundary = max([max(prefit_list), max(fit_b_list), max(fit_s_list)])*10.
min_boundary = min([min(prefit_list), min(fit_b_list), min(fit_s_list)])/10.
if min_boundary == 0: min_boundary = 1e-7
mountainrange_prefit.Draw("HIST")
mountainrange_fit_b.Draw("HIST SAME")
mountainrange_fit_s.Draw("HIST SAME")
mountainrange_prefit.SetLineColor(pyr.kBlack)
mountainrange_fit_b.SetLineColor(pyr.kRed)
mountainrange_fit_s.SetLineColor(pyr.kOrange)
mountainrange_prefit.SetStats(0)
mountainrange_fit_b.SetStats(0)
mountainrange_fit_s.SetStats(0)
mountainrange_prefit.GetXaxis().SetTitle("Histogram bins")
pyr.gPad.SetLogy(True)
mountainrange_prefit.GetYaxis().SetRangeUser(min_boundary, max_boundary)
mountainrange_fit_b.GetYaxis().SetRangeUser(min_boundary, max_boundary)
mountainrange_fit_s.GetYaxis().SetRangeUser(min_boundary, max_boundary)
legend = pyr.TLegend(0.8, 0.8, 0.9, 0.9)
legend.AddEntry(mountainrange_prefit, "prefit")
legend.AddEntry(mountainrange_fit_b, "fit_b")
legend.AddEntry(mountainrange_fit_s, "fit_s")
legend.Draw()
canvas.SaveAs("fitDiagnostics_plots_{}/{}.pdf".format(args.cardname, hist_name))
canvas.SaveAs("fitDiagnostics_plots_{}/{}.png".format(args.cardname, hist_name))
_rhists = []
for _, title in productions:
rhist = histograms[title].Clone('ratio_' + histograms[title].GetName())
_rhists.append(rhist)
rhist.Divide(htotal)
rstack.Add(rhist)
rstack.Draw('SAME HIST')
uncert = htotal.Clone('uncert')
atotal = rnp.hist2array(htotal, copy=False)
err2s = rnp.array(uncert.GetSumw2(), copy=False)
err2s[1:-1] /= np.square(atotal)
rnp.array2hist(np.ones_like(atotal), uncert)
uncert.Draw('SAME E2')
ratiopad.SetTicky(1)
ratiopad.Update()
if args.config in ['fiducial', 'prefit']:
canvas.raxes[0].SetTitle('fractions')
rframe.SetMinimum(0.)
rframe.SetMaximum(1.)
elif args.config == 'postfit':
altrhist = althtotal.Clone('altrhist')
altrhist.SetTitle('')
def FileToHist(self, maxfilesize=100000, pt_cuts=[]):
pt_cut_min = float(pt_cuts[0])
pt_cut_max = float(pt_cuts[1])
ptcut = str(int(pt_cut_min)) + "_" + str(int(pt_cut_max))
self.LoadNormalization()
os.system("mkdir -p " + self.pathPlots + "/histos/")
for Sample in self.SamplesNames:
SubSample = self.Samples_dict[Sample][0]
for others in ["", "_others"]:
f = ROOT.TFile.Open(
self.pathPlots + "/histos/" + Sample + others + "_" +
self.ptrange + "_ptcut_" + ptcut + ".root", "RECREATE")
savename = self.NHBDict[Sample][SubSample].outdir.replace(
"/Vars/", "/Inputs/") + "TopJet" + others + self.NHBDict[
Sample][SubSample].FileExt.replace(
"index", self.ptrange + "_*").replace(
SubSample, Sample)
filenameTemplate = sorted(glob(savename))
savename = savename.replace("TopJet", "/histos/TopJet")
nElements = 0
Objs = {"Jet": [], "PF": [], "Image": []}
for fn in filenameTemplate:
if nElements >= maxfilesize: break
TopJet = np.load(fn)
if len(TopJet) <= 0: continue
nElements += len(TopJet)
PT_mask = (TopJet[:, self.SubSetVars["Jet"]["jetpt"][1]] >
pt_cut_min) * (
TopJet[:,
self.SubSetVars["Jet"]["jetpt"][1]] <
pt_cut_max)
Objs["Jet"].append(TopJet[PT_mask])
Objs["PF"].append(
np.load(fn.replace("TopJet", "PFParticles"))[PT_mask])
Objs["Image"].append(
np.load(fn.replace("TopJet", "Image"))[PT_mask])
for Obj in self.ObjNames:
if len(Objs[Obj]) <= 0: continue
isImage = Obj == "Image"
Objs[Obj] = np.concatenate(Objs[Obj])
if len(Objs[Obj]) <= 0: continue
if Obj == "PF":
Objs[Obj] = np.concatenate(Objs[Obj], axis=0)
for VarName in self.SubSetVars[Obj]:
index = self.SubSetVars[Obj][VarName][1]
min, max, bin = self.SetRanges(VarName)
h_ = ROOT.TH1F(
VarName, "; " + VarName + "; A.U.", bin, min,
max) if not isImage else ROOT.TH2F(
"Image_" + VarName, "; #eta; #phi", self.n_eta,
-self.Radius, self.Radius, self.n_phi,
-self.Radius, self.Radius)
fill_hist(
h_,
Objs[Obj][:,
index]) if not isImage else array2hist(
np.sum(Objs[Obj][:, index, :, :],
axis=0), h_)
h_.Write()
if Obj != "Jet": continue
min = self.ApplyNormalization2(min, VarName)
max = self.ApplyNormalization2(max, VarName)
self.ApplyNormalization(Objs[Obj][:, index], VarName)
h_ = ROOT.TH1F(
VarName + "_norm", "; " + VarName + "; A.U.", bin,
min, max) if not isImage else ROOT.TH2F(
"Image_" + VarName + "_norm", "; #eta; #phi",
self.n_eta, -self.Radius, self.Radius,
self.n_phi, -self.Radius, self.Radius)
fill_hist(
h_,
Objs[Obj][:,
index]) if not isImage else array2hist(
np.sum(Objs[Obj][:, index, :, :],
axis=0), h_)
h_.Write()
f.Close()
def plotstack(stacks, signals, uncerts, gobss, irow):
ymax = 0.
rmin = 0.
rmax = 0.
for icol in range(ncol):
gobs = gobss[icol]
uncert = uncerts[icol]
signal = signals[icol]
obsmax = max(gobs.GetY()[ip] + gobs.GetErrorYhigh(ip)
for ip in range(gobs.GetN()))
uncmax = max(
uncert.GetBinContent(ix) + uncert.GetBinError(ix)
for ix in range(1,
uncert.GetNbinsX() + 1))
ymax = max(ymax, obsmax, uncmax)
obsarray = rnp.array(ROOT.TArrayD(gobs.GetN(), gobs.GetY()))
bkg = rnp.hist2array(uncert)
bkg -= rnp.hist2array(signal, copy=False)
obsarray -= bkg
mm = obsarray.min() - gobs.GetErrorYlow(np.argmin(obsarray))
while rmin > mm * 1.1:
rmin -= 2.
mm = obsarray.max() + gobs.GetErrorYhigh(np.argmax(obsarray))
while rmax < mm * 1.1:
rmax += 2.
if int(rmax) % 10 == 0: # just to avoid axis label clashes
rmax -= 1.
canvas.yaxes[irow].SetNdivisions(405)
canvas.yaxes[irow].SetTitle('events / GeV')
canvas.raxes[irow].SetNdivisions(204)
for icol in range(ncol):
stack = stacks[icol]
signal = signals[icol]
uncert = uncerts[icol]
gobs = gobss[icol]
frame = uncert.Clone('frame')
_temporaries.append(frame)
frame.SetTitle('')
frame.Reset()
frame.SetTickLength(0.05, 'X')
frame.SetTickLength(0.03, 'Y')
frame.GetXaxis().SetNdivisions(canvas.xaxis.GetNdiv())
frame.GetXaxis().SetLabelSize(0.)
frame.GetXaxis().SetTitle('')
frame.GetYaxis().SetNdivisions(canvas.yaxes[irow].GetNdiv())
frame.GetYaxis().SetLabelSize(0.)
frame.SetMinimum(0.)
frame.SetMaximum(ymax * 1.4)
distpad = canvas.cd((irow * ncol + icol) * 2 + 1)
distpad.SetLogy(False)
distpad.SetTicky(1)
frame.Draw('HIST')
stack.Draw('SAME HIST')
uncert.Draw('SAME E2')
gobs.Draw('PZ')
distpad.Update()
runcert = uncert.Clone('runcert')
_temporaries.append(runcert)
bkg = rnp.hist2array(runcert)
bkg -= rnp.hist2array(signal, copy=False)
obsarray = rnp.array(ROOT.TArrayD(gobs.GetN(), gobs.GetY()))
obsarray -= bkg
robs = gobs.Clone('robs')
_temporaries.append(robs)
for ip in range(gobs.GetN()):
robs.SetPoint(ip, gobs.GetX()[ip], obsarray[ip])
rnp.array2hist(np.zeros_like(bkg), runcert)
rframe = frame.Clone('rframe')
_temporaries.append(rframe)
rframe.GetXaxis().SetTickLength(0.15)
rframe.GetYaxis().SetNdivisions(canvas.raxes[irow].GetNdiv())
rframe.SetMinimum(rmin)
rframe.SetMaximum(rmax)
ratiopad = canvas.cd((irow * ncol + icol) * 2 + 2)
ratiopad.SetLogy(False)
ratiopad.SetGridy(False)
ratiopad.SetTicky(1)
rframe.Draw('HIST')
runcert.Draw('SAME E2')
zero.DrawLine(rframe.GetXaxis().GetXmin(), 0.,
rframe.GetXaxis().GetXmax(), 0.)
signal.Draw('HIST SAME')
robs.Draw('PZ')
ratiopad.Update()
def main(args):
# Initialise
args, cfg = initialise(args)
# Load data
data, _, _ = load_data(args.input + 'data.h5', train=True)
msk_sig = data['signal'] == 1
msk_bkg = ~msk_sig
# -------------------------------------------------------------------------
####
#### # Initialise Keras backend
#### initialise_backend(args)
####
#### # Neural network-specific initialisation of the configuration dict
#### initialise_config(args, cfg)
####
#### # Keras import(s)
#### from keras.models import load_model
####
#### # NN
#### from run.adversarial.common import add_nn
#### with Profile("NN"):
#### classifier = load_model('models/adversarial/classifier/full/classifier.h5')
#### add_nn(data, classifier, 'NN')
#### pass
# -------------------------------------------------------------------------
# Fill measured profile
profile_meas, _ = fill_profile(data[msk_bkg])
# Add k-NN variable
knnfeat = 'knn'
add_knn(data,
newfeat=knnfeat,
path='models/knn/knn_{}_{}.pkl.gz'.format(VAR, EFF))
# Loading KNN classifier
knn = loadclf('models/knn/knn_{:s}_{:.0f}.pkl.gz'.format(VAR, EFF))
# Filling fitted profile
with Profile("Filling fitted profile"):
rebin = 8
edges, centres = dict(), dict()
for ax, var in zip(['x', 'y'], [VARX, VARY]):
# Short-hands
vbins, vmin, vmax = AXIS[var]
# Re-binned bin edges @TODO: Make standardised right away?
edges[ax] = np.interp(
np.linspace(0, vbins, vbins * rebin + 1, endpoint=True),
range(vbins + 1),
np.linspace(vmin, vmax, vbins + 1, endpoint=True))
# Re-binned bin centres
centres[ax] = edges[ax][:-1] + 0.5 * np.diff(edges[ax])
pass
# Get predictions evaluated at re-binned bin centres
g = dict()
g['x'], g['y'] = np.meshgrid(centres['x'], centres['y'])
g['x'], g['y'] = standardise(g['x'], g['y'])
X = np.vstack((g['x'].flatten(), g['y'].flatten())).T
fit = knn.predict(X).reshape(g['x'].shape).T
# Fill ROOT "profile"
profile_fit = ROOT.TH2F('profile_fit', "",
len(edges['x']) - 1, edges['x'].flatten('C'),
len(edges['y']) - 1, edges['y'].flatten('C'))
root_numpy.array2hist(fit, profile_fit)
pass
# Plotting
with Profile("Plotting"):
for fit in [False, True]:
# Select correct profile
profile = profile_fit if fit else profile_meas
# Plot
plot(profile, fit)
pass
pass
# Plotting local selection efficiencies for D2-kNN < 0
# -- Compute signal efficiency
for sig, msk in zip([True, False], [msk_sig, msk_bkg]):
if sig:
rgbs = [(247 / 255., 251 / 255., 255 / 255.),
(222 / 255., 235 / 255., 247 / 255.),
(198 / 255., 219 / 255., 239 / 255.),
(158 / 255., 202 / 255., 225 / 255.),
(107 / 255., 174 / 255., 214 / 255.),
(66 / 255., 146 / 255., 198 / 255.),
(33 / 255., 113 / 255., 181 / 255.),
(8 / 255., 81 / 255., 156 / 255.),
(8 / 255., 48 / 255., 107 / 255.)]
red, green, blue = map(np.array, zip(*rgbs))
nb_cols = len(rgbs)
stops = np.linspace(0, 1, nb_cols, endpoint=True)
else:
rgbs = [(255 / 255., 51 / 255., 4 / 255.),
(247 / 255., 251 / 255., 255 / 255.),
(222 / 255., 235 / 255., 247 / 255.),
(198 / 255., 219 / 255., 239 / 255.),
(158 / 255., 202 / 255., 225 / 255.),
(107 / 255., 174 / 255., 214 / 255.),
(66 / 255., 146 / 255., 198 / 255.),
(33 / 255., 113 / 255., 181 / 255.),
(8 / 255., 81 / 255., 156 / 255.),
(8 / 255., 48 / 255., 107 / 255.)]
red, green, blue = map(np.array, zip(*rgbs))
nb_cols = len(rgbs)
stops = np.array([0] + list(
np.linspace(0, 1, nb_cols - 1, endpoint=True) *
(1. - EFF / 100.) + EFF / 100.))
pass
ROOT.TColor.CreateGradientColorTable(nb_cols, stops, red, green, blue,
NB_CONTOUR)
# Define arrays
shape = (AXIS[VARX][0], AXIS[VARY][0])
bins = [
np.linspace(AXIS[var][1],
AXIS[var][2],
AXIS[var][0] + 1,
endpoint=True) for var in VARS
]
x, y, z = (np.zeros(shape) for _ in range(3))
# Create `profile` histogram
profile = ROOT.TH2F('profile', "",
len(bins[0]) - 1, bins[0].flatten('C'),
len(bins[1]) - 1, bins[1].flatten('C'))
# Compute inclusive efficiency in bins of `VARY`
effs = list()
for edges in zip(bins[1][:-1], bins[1][1:]):
msk_bin = (data[VARY] > edges[0]) & (data[VARY] < edges[1])
msk_pass = data[knnfeat] < 0
num = data.loc[msk & msk_bin & msk_pass,
'weight_test'].values.sum()
den = data.loc[msk & msk_bin, 'weight_test'].values.sum()
effs.append(num / den)
pass
# Fill profile
for i, j in itertools.product(*map(range, shape)):
# Bin edges in x and y
edges = [bin[idx:idx + 2] for idx, bin in zip([i, j], bins)]
# Masks
msks = [(data[var] > edges[dim][0]) & (data[var] <= edges[dim][1])
for dim, var in enumerate(VARS)]
msk_bin = reduce(lambda x, y: x & y, msks)
data_ = data[msk & msk_bin]
# Set non-zero bin content
if np.sum(msk & msk_bin):
msk_pass = data_[knnfeat] < 0
num = data.loc[msk & msk_bin & msk_pass,
'weight_test'].values.sum()
den = data.loc[msk & msk_bin, 'weight_test'].values.sum()
eff = num / den
profile.SetBinContent(i + 1, j + 1, eff)
pass
pass
c = rp.canvas(batch=True)
pad = c.pads()[0]._bare()
pad.cd()
pad.SetRightMargin(0.20)
pad.SetLeftMargin(0.15)
pad.SetTopMargin(0.10)
# Styling
profile.GetXaxis().SetTitle("Large-#it{R} jet " +
latex(VARX, ROOT=True) +
" = log(m^{2}/p_{T}^{2})")
profile.GetYaxis().SetTitle("Large-#it{R} jet " +
latex(VARY, ROOT=True) + " [GeV]")
profile.GetZaxis().SetTitle("Selection efficiency for %s^{(%s%%)}" %
(latex(VAR, ROOT=True), EFF))
profile.GetYaxis().SetNdivisions(505)
profile.GetZaxis().SetNdivisions(505)
profile.GetXaxis().SetTitleOffset(1.4)
profile.GetYaxis().SetTitleOffset(1.8)
profile.GetZaxis().SetTitleOffset(1.3)
zrange = (0., 1.)
if zrange:
profile.GetZaxis().SetRangeUser(*zrange)
pass
profile.SetContour(NB_CONTOUR)
# Draw
profile.Draw('COLZ')
# Decorations
c.text(qualifier=QUALIFIER, ymax=0.92, xmin=0.15)
c.text(["#sqrt{s} = 13 TeV", "#it{W} jets" if sig else "Multijets"],
ATLAS=False)
# -- Efficiencies
xaxis = profile.GetXaxis()
yaxis = profile.GetYaxis()
tlatex = ROOT.TLatex()
tlatex.SetTextColor(ROOT.kGray + 2)
tlatex.SetTextSize(0.023)
tlatex.SetTextFont(42)
tlatex.SetTextAlign(32)
xt = xaxis.GetBinLowEdge(xaxis.GetNbins())
for eff, ibin in zip(effs, range(1, yaxis.GetNbins() + 1)):
yt = yaxis.GetBinCenter(ibin)
tlatex.DrawLatex(
xt, yt, "%s%.1f%%" %
("#bar{#varepsilon}^{rel}_{%s} = " %
('sig' if sig else 'bkg') if ibin == 1 else '', eff * 100.))
pass
# -- Bounds
BOUNDS[0].DrawCopy("SAME")
BOUNDS[1].DrawCopy("SAME")
c.latex("m > 50 GeV",
-4.5,
BOUNDS[0].Eval(-4.5) + 30,
align=21,
angle=-37,
textsize=13,
textcolor=ROOT.kGray + 3)
c.latex("m < 300 GeV",
-2.5,
BOUNDS[1].Eval(-2.5) - 30,
align=23,
angle=-57,
textsize=13,
textcolor=ROOT.kGray + 3)
# Save
mkdir('figures/knn/')
c.save('figures/knn/knn_eff_{}_{:s}_{:.0f}.pdf'.format(
'sig' if sig else 'bkg', VAR, EFF))
pass
return
def plotstack(stack, signal, uncert, gobs, ivert):
uncert.SetTickLength(0., 'X')
uncert.SetTickLength(0., 'Y')
uncert.SetFillColor(ROOT.kBlack)
uncert.SetFillStyle(3003)
uncert.SetLineWidth(0)
uncert.GetXaxis().SetNdivisions(120)
uncert.GetYaxis().SetNdivisions(110)
distpad = canvas.cd(ivert * 2 + 1)
distpad.SetLogy(False)
frame = uncert.Clone('frame')
_temporaries.append(frame)
frame.SetTitle('')
frame.Reset()
frame.GetXaxis().SetLabelSize(0.)
frame.GetXaxis().SetTitle('')
obsmax = max(gobs.GetY()[ip] + gobs.GetErrorYhigh(ip)
for ip in range(gobs.GetN()))
frame.SetMinimum(0.)
frame.SetMaximum(max(obsmax, uncert.GetMaximum()) * 1.4)
frame.Draw('HIST')
stack.Draw('SAME HIST')
uncert.Draw('SAME E2')
gobs.Draw('PZ')
distpad.Update()
ratiopad = canvas.cd(ivert * 2 + 2)
ratiopad.SetGridy(False)
runcert = uncert.Clone('runcert')
_temporaries.append(runcert)
runcert.SetTitle('')
bkg = rnp.hist2array(runcert)
bkg -= rnp.hist2array(signal, copy=False)
obsarray = rnp.array(ROOT.TArrayD(gobs.GetN(), gobs.GetY()))
obsarray -= bkg
robs = gobs.Clone('robs')
_temporaries.append(robs)
for ip in range(gobs.GetN()):
robs.SetPoint(ip, gobs.GetX()[ip], obsarray[ip])
rnp.array2hist(np.zeros_like(bkg), runcert)
runcert.SetTickLength(0., 'X')
runcert.SetTickLength(0., 'Y')
runcert.GetXaxis().SetLabelSize(0.)
runcert.GetXaxis().SetTitle('')
runcert.GetYaxis().SetLabelSize(0.)
runcert.GetYaxis().SetTitle('')
runcert.GetYaxis().SetNdivisions(502)
runcert.Draw('E2')
zero = ROOT.TLine(runcert.GetXaxis().GetXmin(), 0.,
runcert.GetXaxis().GetXmax(), 0.)
_temporaries.append(zero)
zero.SetLineColor(ROOT.kBlack)
zero.SetLineWidth(1)
zero.SetLineStyle(ROOT.kSolid)
zero.Draw()
signal.Draw('HIST SAME')
robs.Draw('PZ')
rmin = 0.
while rmin > obsarray.min() * 1.1:
rmin -= 10.
rmax = 0.
while rmax < obsarray.max() * 1.1:
rmax += 10.
runcert.SetMaximum(rmax)
runcert.SetMinimum(rmin)
ratiopad.Update()
parameters.variables.ieta = 'abs(ieta)'
parameters.variables.et = 'et_raw'
parameters.variables.ntt = 'ntt'
parameters.variables.rho = 'rho'
parameters.variables.iso = 'iso'
## Steps
parameters.steps.train_workingpoints = True
parameters.steps.fit_ntt_vs_rho = True
parameters.steps.test_workingpoints = True
parameters.steps.do_compression = True
## eta-pt efficiency shape
parameters.eta_pt_optimization.eta_optimization = 'none'
efficiencies_low_array = np.array([0.80,0.80,0.80,0.80,0.80,0.75,0.80, 0.85])
efficiencies_high_array = np.array([0.92,0.95,0.95,0.95,0.95,0.95,0.95, 0.95])
eta_binning = [0.5, 3.5, 6.5, 9.5, 13.5, 18.5, 22.5, 25.5, 28.5]
efficiencies_low = Hist(eta_binning)
efficiencies_high = Hist(eta_binning)
array2hist(efficiencies_low_array, efficiencies_low)
array2hist(efficiencies_high_array, efficiencies_high)
parameters.eta_pt_optimization.eta_pt_efficiency_shapes = \
double_slope_relaxation_vs_pt(efficiencies_low,\
efficiencies_high,\
threshold_low=56.,\
threshold_high=80.,\
eff_min=0.5,\
max_et=120.)
## LUT Compression
parameters.compression.eta = [0,5,6,9,10,12,13,14,17,18,19,20,23,24,25,26,32]
parameters.compression.et = [0,18,20,22,28,32,37,42,52,63,73,81,87,91,111,151,256]
parameters.compression.ntt = [0,6,11,16,21,26,31,36,41,46,51,56,61,66,71,76,81,86,91,96,101,106,111,116,121,126,131,136,141,146,151,156,256]
def optimize_background_rejection_vs_ieta(effs, isolations, signalfile, signaltree, backgroundfile, backgroundtree, inputnames=['abs(ieta)','ntt'], targetname='iso', cut='et>10'):
ieta_binning = [0.5, 3.5, 6.5, 9.5, 13.5, 18.5, 24.5, 27.5]
# Compute signal efficiencies
ninputs = len(inputnames)
branches = copy.deepcopy(inputnames)
branches.append(targetname)
data = root2array(signalfile, treename=signaltree, branches=branches, selection=cut)
data = data.view((np.float64, len(data.dtype.names)))
inputs = data[:, range(ninputs)].astype(np.float32)
targets = data[:, [ninputs]].astype(np.float32).ravel()
xs = data[:, [0]].astype(np.float32).ravel()
# fill signal ieta histogram and normalize to 1
histo_signal = Hist(ieta_binning)
fill_hist(histo_signal, xs)
#histo_signal.Scale(1./histo_signal.integral(overflow=True))
# signal_efficiencies is a 2D array
# The first dimension corresponds to different ieta values
# The second dimension corresponds to different working points
signal_efficiencies = [graph2array(efficiency.efficiency_graph(pass_function=(lambda x:np.less(x[1],iso.predict(x[0]))), function_inputs=(inputs,targets), xs=xs, bins=ieta_binning))[:,[1]].ravel() for iso in isolations]
signal_efficiencies = np.column_stack(signal_efficiencies)
# Compute background efficiencies
ninputs = len(inputnames)
branches = copy.deepcopy(inputnames)
branches.append(targetname)
data = root2array(backgroundfile, treename=backgroundtree, branches=branches, selection=cut)
data = data.view((np.float64, len(data.dtype.names)))
inputs = data[:, range(ninputs)].astype(np.float32)
targets = data[:, [ninputs]].astype(np.float32).ravel()
xs = data[:, [0]].astype(np.float32).ravel()
# fill background ieta histogram and normalize to 1
histo_background = Hist(ieta_binning)
fill_hist(histo_background, xs)
#histo_background.Scale(1./histo_background.integral(overflow=True))
# background_efficiencies is a 2D array
# The first dimension corresponds to different ieta values
# The second dimension corresponds to different working points
background_efficiencies = [graph2array(efficiency.efficiency_graph(pass_function=(lambda x:np.less(x[1],iso.predict(x[0]))), function_inputs=(inputs,targets), xs=xs, bins=ieta_binning))[:,[1]].ravel() for iso in isolations]
background_efficiencies = np.column_stack(background_efficiencies)
signal_efficiencies_diff_graphs = []
background_efficiencies_diff_graphs = []
optimal_points_graphs = []
optimal_points = []
# compute best working point for each ieta (loop on ieta)
for i,(signal_effs,background_effs) in enumerate(zip(signal_efficiencies, background_efficiencies)):
# Compute the probability of signal in this ieta bin for the different efficiency points
# It is assumed that the cut is applied only in this bin, all the other bins keep the same number of entries
n_i = histo_signal[i+1].value
n_tot = histo_signal.integral(overflow=True)
proba_signal = np.array([n_i*eff/(n_tot-n_i*(1.-eff)) for eff in signal_effs])
# Same as above, but for background
n_i = histo_background[i+1].value
n_tot = histo_background.integral(overflow=True)
proba_background = np.array([n_i*eff/(n_tot-n_i*(1.-eff)) for eff in background_effs])
signal_efficiencies_diff_graph, background_efficiencies_diff_graph, optimal_points_graph, optimal_point = find_best_working_point(effs, signal_effs, background_effs, proba_signal, proba_background)
signal_efficiencies_diff_graph.SetName('efficiencies_signal_ieta_{}'.format(i))
background_efficiencies_diff_graph.SetName('efficiencies_background_ieta_{}'.format(i))
optimal_points_graph.SetName('signal_background_optimal_points_ieta_{}'.format(i))
signal_efficiencies_diff_graphs.append(signal_efficiencies_diff_graph)
background_efficiencies_diff_graphs.append(background_efficiencies_diff_graph)
optimal_points_graphs.append(optimal_points_graph)
optimal_points.append(optimal_point)
optimal_points_histo = Hist(ieta_binning)
array2hist(optimal_points, optimal_points_histo)
return signal_efficiencies_diff_graphs, background_efficiencies_diff_graphs, optimal_points_graphs, optimal_points_histo
.format(args.slot, oh, args.mapping))
else:
chanOrStripLabel = "Readout Strip"
(histArray, edges) = rp.hist2array(
vfatLatHists2D[args.slot][oh][vfat], return_edges=True)
remappedArray = np.zeros(histArray.shape)
xMax = histArray.shape[0]
yMax = histArray.shape[1]
for lat in range(0, xMax):
for vfatCH in range(0, yMax):
strip = dictMapping[
args.slot][oh][vfat]['Strip'][vfatCH]
remappedArray[lat][strip] = histArray[lat][vfatCH]
pass
pass
vfatLatHists2D[args.slot][oh][vfat] = rp.array2hist(
remappedArray, vfatLatHists2D[args.slot][oh][vfat])
pass
pass
# Set Style
vfatHitMulti[args.slot][oh][vfat].SetTitle("VFAT{0}".format(vfat))
vfatHitMulti[args.slot][oh][vfat].GetXaxis().SetTitle(
"Hit Multiplicity per Event")
vfatHitMulti[args.slot][oh][vfat].GetXaxis().SetRangeUser(
1e-1, 129)
vfatHitMulti[args.slot][oh][vfat].GetYaxis().SetTitle("N")
vfatHitMulti[args.slot][oh][vfat].GetYaxis().SetRangeUser(
1e-1, 1e8)
# Set Style
vfatLatHists[args.slot][oh][vfat].SetTitle("VFAT{0}".format(vfat))
if args.ratio:
max_boundary = 10.
min_boundary = 0.00001
else:
max_boundary = max([
max(hist_central_array[np.nonzero(hist_central_array)]),
max(hist_upper_array[np.nonzero(hist_upper_array)]),
max(hist_lower_array[np.nonzero(hist_lower_array)])
]) * 10.
min_boundary = min([
min(hist_central_array[np.nonzero(hist_central_array)]),
min(hist_upper_array[np.nonzero(hist_upper_array)]),
min(hist_lower_array[np.nonzero(hist_lower_array)])
]) / 10.
root_numpy.array2hist(hist_central_array, mountainrange_central)
root_numpy.array2hist(hist_upper_array, mountainrange_upper)
root_numpy.array2hist(hist_lower_array, mountainrange_lower)
#mountainrange_central = root_numpy.array2hist(hist_central_array)
#mountainrange_upper = root_numpy.array2hist(hist_upper_array)
#mountainrange_lower = root_numpy.array2hist(hist_lower_array)
#root_numpy.array2hist(hist_central_array, mountainrange_central_ratio)
#root_numpy.array2hist(hist_upper_array, mountainrange_upper_ratio)
#root_numpy.array2hist(hist_lower_array, mountainrange_lower_ratio)
if args.ratio:
mountainrange_upper.Divide(mountainrange_central)
mountainrange_lower.Divide(mountainrange_central)
mountainrange_central.Divide(mountainrange_central)
if debug: print("Drawing mountainrange")
parameters.variables.iso = 'iso'
## Steps
parameters.steps.train_workingpoints = True
parameters.steps.fit_ntt_vs_rho = True
parameters.steps.test_workingpoints = True
parameters.steps.do_compression = True
## eta-pt efficiency shape
parameters.eta_pt_optimization.eta_optimization = 'none'
efficiencies_low_array = np.array(
[0.80, 0.80, 0.80, 0.80, 0.80, 0.75, 0.80, 0.85])
efficiencies_high_array = np.array(
[0.92, 0.95, 0.95, 0.95, 0.95, 0.95, 0.95, 0.95])
eta_binning = [0.5, 3.5, 6.5, 9.5, 13.5, 18.5, 22.5, 25.5, 28.5]
efficiencies_low = Hist(eta_binning)
efficiencies_high = Hist(eta_binning)
array2hist(efficiencies_low_array, efficiencies_low)
array2hist(efficiencies_high_array, efficiencies_high)
parameters.eta_pt_optimization.eta_pt_efficiency_shapes = \
double_slope_relaxation_vs_pt(efficiencies_low,\
efficiencies_high,\
threshold_low=56.,\
threshold_high=80.,\
eff_min=0.5,\
max_et=120.)
## LUT Compression
parameters.compression.eta = [
0, 5, 6, 9, 10, 12, 13, 14, 17, 18, 19, 20, 23, 24, 25, 26, 32
]
parameters.compression.et = [
0, 18, 20, 22, 28, 32, 37, 42, 52, 63, 73, 81, 87, 91, 111, 151, 256
]
# ### Plot jet images
# In[ ]:
from ROOT import gStyle, kLightTemperature, kBlackBody, kCool, kColorPrintableOnGrey , kPastel , kViridis
from IPython.display import Image
print("Number of jet images: ", len(jet_images))
sum_images = np.sum(jet_images, axis=0)
h_title = "Jet Image, "+str(pt_low)+" < p_{T} < "+str(pt_high)+" GeV"
h = TH2D( "h_jet_image", h_title, n_bins, ji_x_range[0], ji_x_range[1], n_bins, ji_y_range[0], ji_y_range[1])
rtnp.array2hist(sum_images, h)
#Plot using root
gStyle.SetOptStat(0)
# gStyle.SetPalette(kPastel)
# gStyle.SetPalette(kCool)
gStyle.SetPalette(kColorPrintableOnGrey)
c = TCanvas("c", "c", 800, 600)
c.SetLogz()
#h.SetAxisRange(1, 100000, "Z")
h.GetXaxis().SetTitle("#eta")
h.GetYaxis().SetTitle("#phi")
h.Draw("colz")
