Beispiel #1
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 def test_empty_strands(self):
     self.assertEqual(hamming.distance("", ""), 0)
Beispiel #2
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 def test_single_letter_identical_strands(self):
     self.assertEqual(hamming.distance("A", "A"), 0)
Beispiel #3
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 def test_disallow_second_strand_longer(self):
     with self.assertRaisesWithMessage(ValueError):
         hamming.distance("ATA", "AGTG")
Beispiel #4
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 def test_disallow_right_empty_strand(self):
     with self.assertRaisesWithMessage(ValueError):
         hamming.distance("G", "")
Beispiel #5
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 def test_long_different_strands(self):
     self.assertEqual(hamming.distance("GGACGGATTCTG", "AGGACGGATTCT"), 9)
Beispiel #6
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 def test_disallow_first_strand_longer(self):
     with self.assertRaisesWithMessage(ValueError):
         hamming.distance("AATG", "AAA")
Beispiel #7
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 def test_single_letter_different_strands(self):
     self.assertEqual(hamming.distance("G", "T"), 1)
Beispiel #8
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 def test_long_identical_strands(self):
     self.assertEqual(hamming.distance("GGACTGAAATCTG", "GGACTGAAATCTG"), 0)
Beispiel #9
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 def test_hamming_distance_in_very_long_strand(self):
     self.assertEqual(9, distance('GGACGGATTCTG', 'AGGACGGATTCT'))
Beispiel #10
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 def test_no_difference_between_identical_strands(self):
     self.assertEqual(0, distance('A', 'A'))
Beispiel #11
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 def test_large_hamming_distance(self):
     self.assertEqual(4, distance('GATACA', 'GCATAA'))
Beispiel #12
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 def test_small_hamming_distance_in_longer_strand(self):
     self.assertEqual(1, distance('GGACG', 'GGTCG'))
Beispiel #13
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 def test_small_hamming_distance(self):
     self.assertEqual(1, distance('AT', 'CT'))
Beispiel #14
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 def test_complete_hamming_distance_of_for_small_strand(self):
     self.assertEqual(2, distance('AG', 'CT'))
Beispiel #15
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 def test_complete_hamming_distance_of_for_single_nucleotide_strand(self):
     self.assertEqual(1, distance('A', 'G'))