Beispiel #1
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def load_rest_to_colin():
    args = fmri.read_cmd_args(['-s', subject])
    args.task = 'REST'
    args.function = 'project_volume_to_surface,find_clusters'
    args.contrast = 'rest'
    args.volume_name = 'spmT_0001'
    fmri.main(subject, mri_subject, args)
Beispiel #2
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def fsfast():
    args = fmri.read_cmd_args(['-s', subject])
    args.task = 'MSIT'
    args.function = 'fmri_pipeline'
    args.contrast_name = 'interference'
    args.atlas = 'laus250'
    fmri.main(subject, mri_subject, args)
Beispiel #3
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def fsfast():
    args = fmri.read_cmd_args(['-s', subject])
    args.task = 'MSIT'
    args.function = 'fmri_pipeline'
    args.contrast_name = 'interference'
    args.atlas = 'laus250'
    fmri.main(subject, mri_subject, args)
Beispiel #4
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def load_rest_to_colin():
    args = fmri.read_cmd_args(['-s', subject])
    args.task = 'REST'
    args.function = 'project_volume_to_surface,find_clusters'
    args.contrast = 'rest'
    args.volume_name = 'spmT_0001'
    fmri.main(subject, mri_subject, args)
Beispiel #5
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def pet():
    args = fmri.read_cmd_args(['-s', subject])
    args.threshold = 0
    args.is_pet = True
    args.symetric_colors = False
    args.atlas = 'laus250'
    fmri.main(subject, mri_subject, args)
    '-s s02 --threshold 0 --is_pet 1 --symetric_colors 0 --overwrite_surf_data 1 --remote_subject_dir /local_mount/space/thibault/1/users/npeled/artur/recon_tese/{subject}'
Beispiel #6
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def pet():
    args = fmri.read_cmd_args(['-s', subject])
    args.threshold = 0
    args.is_pet = True
    args.symetric_colors = False
    args.atlas = 'laus250'
    fmri.main(subject, mri_subject, args)
    '-s s02 --threshold 0 --is_pet 1 --symetric_colors 0 --overwrite_surf_data 1 --remote_subject_dir /local_mount/space/thibault/1/users/npeled/artur/recon_tese/{subject}'