def storeFile(syn,
fileName,
parentId,
center,
fileFormat,
dataSubType,
platform=None,
cBioFileFormat=None,
used=None):
logger.info("STORING FILES")
fileEnt = File(fileName, parent=parentId)
fileEnt.center = center
fileEnt.species = "Human"
fileEnt.consortium = 'GENIE'
fileEnt.dataType = "genomicVariants"
fileEnt.fundingAgency = "AACR"
fileEnt.assay = 'targetGeneSeq'
fileEnt.fileFormat = fileFormat
fileEnt.dataSubType = dataSubType
fileEnt.fileStage = "staging"
fileEnt.platform = platform
if platform is not None:
fileEnt.platform = platform
if cBioFileFormat is not None:
fileEnt.cBioFileFormat = cBioFileFormat
ent = syn.store(fileEnt, used=used)
return (ent)
