def getAlignment(deNovoPept, dbPept, AAMap, scoreMatrix, gapOpenPen=-5, gapExtendPen=0):
alignment = An.alignSequences(deNovoPept, dbPept, AAMap, scoreMatrix, gapOpenPen, gapExtendPen)[1][0]
return alignment
def getAlignment(deNovoPept, dbPept, AAMap, scoreMatrix, gapOpenPen=-5, gapExtendPen=0):
alignment = An.alignSequences(deNovoPept, dbPept, AAMap, scoreMatrix, gapOpenPen, gapExtendPen)[1][0]
return alignment
