skipSmallerThan = int(args.skipSmallerThan)
resampleTo = int(args.resampleTo)
csvSep = args.csvSep
addXYZAxes = args.addXYZAxes
tickDistance = args.tickDistance
addCustomAxes = args.addCustomAxes
# Case 1: Use the command line interface
loadFromCmd = tgmmPath != None or csvPath != None or biotracksPath != None or svfPath != None
loaderState2 = None
if loadFromCmd:
if csvPath is not None:
print("Load from CSV...")
loader = dc.CsvLoader(csvPath,
resampleTo=resampleTo,
minTrackLength=skipSmallerThan,
firstLineIsHeader=(csvNoHeader is None),
csvSeparator=csvSep)
if addState2 is not None:
loaderState2 = dc.CsvLoader(
addState2,
resampleTo=resampleTo,
minTrackLength=skipSmallerThan,
firstLineIsHeader=(csvNoHeader is None),
csvSeparator=csvSep)
if tgmmPath is not None:
print("Load from TGMM...")
loader = dc.TgmmLoader(
tgmmPath,
resampleTo=resampleTo,
minTrackLength=skipSmallerThan,
