Ejemplo n.º 1
0
 def test_make_shotgun_scorer(self):
     """make_shotgun_scorer should keep ids matching n queries"""
     sg1 = make_shotgun_scorer(1)
     sg2 = make_shotgun_scorer(2)
     sg3 = make_shotgun_scorer(3)
     sg4 = make_shotgun_scorer(4)
     sg5 = make_shotgun_scorer(5)
     qmes = wrap_qmes(QMEBlast9(self.rec3))
     self.assertEqualItems(sg1(qmes), keep_everything_scorer(qmes))
     self.assertEqualItems(sg2(qmes), \
         ['ece:Z4181','ece:Z4182','ece:Z4183','cvi:CV2421','ecs:ECs3717'])
     self.assertEqualItems(sg3(qmes), \
         ['ece:Z4181','ece:Z4182','ece:Z4183'])
     self.assertEqualItems(sg4(qmes), \
         ['ece:Z4182'])
     self.assertEqualItems(sg5(qmes), [])
Ejemplo n.º 2
0
 def test_make_shotgun_scorer(self):
     """make_shotgun_scorer should keep ids matching n queries"""
     sg1 = make_shotgun_scorer(1)
     sg2 = make_shotgun_scorer(2)
     sg3 = make_shotgun_scorer(3)
     sg4 = make_shotgun_scorer(4)
     sg5 = make_shotgun_scorer(5)
     qmes = wrap_qmes(QMEBlast9(self.rec3))
     self.assertEqualItems(sg1(qmes), keep_everything_scorer(qmes))
     self.assertEqualItems(sg2(qmes), \
         ['ece:Z4181','ece:Z4182','ece:Z4183','cvi:CV2421','ecs:ECs3717'])
     self.assertEqualItems(sg3(qmes), \
         ['ece:Z4181','ece:Z4182','ece:Z4183'])
     self.assertEqualItems(sg4(qmes), \
         ['ece:Z4182'])
     self.assertEqualItems(sg5(qmes), [])
Ejemplo n.º 3
0
 def test_keep_everything_scorer(self):
     """keep_everything_scorer should keep all ids found."""
     k = keep_everything_scorer(wrap_qmes(QMEBlast9(self.rec2)))
     self.assertEqualItems(k, \
         ['ece:Z4181','ecs:ECs3717','spt:SPA2730','cvi:CV2421','ece:Z4182'])
Ejemplo n.º 4
0
 def test_keep_everything_scorer(self):
     """keep_everything_scorer should keep all ids found."""
     k = keep_everything_scorer(wrap_qmes(QMEBlast9(self.rec2)))
     self.assertEqualItems(k, \
         ['ece:Z4181','ecs:ECs3717','spt:SPA2730','cvi:CV2421','ece:Z4182'])