def high_throughput_curation(request): """Entry point for high-throughput curation. Curators can check ChIP and other high-throughput methodologies in the regular submission mode, but if they are submitting data that is primarily based on high-throughput binding assays (e.g. ChIP-seq genomic-SELEX, etc.) they are then encouraged to use the high-throughput submission portal. First few steps are identical to the ones in the regular submission portal. In the site-entry step, two types of data are asked: sites and peaks. As in regular submission portal, sites can be either motif-associated, non-motif-associated or variable-motif-associated (e.g. variable spacing, inverting, anything that is not gapless alignment), which can be entered in sequence-based or coordinate-based modes. Below the site box, curators are able to enter peak data (most likely in coordinate mode). """ # This IS high-throughput submission session_utils.put(request.session, 'high_throughput_curation', True) view = CurationWizard.as_view( [PublicationForm, GenomeForm, TechniquesForm, SiteEntryForm, SiteExactMatchForm, SiteSoftMatchForm, SiteAnnotationForm, GeneRegulationForm, CurationReviewForm], condition_dict={'5': inexact_match_form_condition}) return view(request)
def high_throughput_curation(request): """Entry point for high-throughput curation. Curators can check ChIP and other high-throughput methodologies in the regular submission mode, but if they are submitting data that is primarily based on high-throughput binding assays (e.g. ChIP-seq genomic-SELEX, etc.) they are then encouraged to use the high-throughput submission portal. First few steps are identical to the ones in the regular submission portal. In the site-entry step, two types of data are asked: sites and peaks. As in regular submission portal, sites can be either motif-associated, non-motif-associated or variable-motif-associated (e.g. variable spacing, inverting, anything that is not gapless alignment), which can be entered in sequence-based or coordinate-based modes. Below the site box, curators are able to enter peak data (most likely in coordinate mode). """ # This IS high-throughput submission session_utils.put(request.session, 'high_throughput_curation', True) view = CurationWizard.as_view( [ PublicationForm, GenomeForm, TechniquesForm, SiteEntryForm, SiteExactMatchForm, SiteSoftMatchForm, SiteAnnotationForm, GeneRegulationForm, CurationReviewForm ], condition_dict={'5': inexact_match_form_condition}) return view(request)
def curation(request): """Entry point for the curation.""" session_utils.remove(request.session, 'previous_curation') # This is not high-throughput submission. session_utils.put(request.session, 'high_throughput_curation', False) view = CurationWizard.as_view( [ PublicationForm, GenomeForm, TechniquesForm, SiteEntryForm, SiteExactMatchForm, SiteSoftMatchForm, SiteAnnotationForm, GeneRegulationForm, CurationReviewForm ], condition_dict={'5': inexact_match_form_condition}) return view(request)
def curation(request): """Entry point for the curation.""" session_utils.remove(request.session, 'previous_curation') # This is not high-throughput submission. session_utils.put(request.session, 'high_throughput_curation', False) view = CurationWizard.as_view( [PublicationForm, GenomeForm, TechniquesForm, SiteEntryForm, SiteExactMatchForm, SiteSoftMatchForm, SiteAnnotationForm, GeneRegulationForm, CurationReviewForm], condition_dict={'5': inexact_match_form_condition}) return view(request)