def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) self.listOfUnitDefinitions = None self.form = ModelUnitsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) self.optimization = None self.form = DataOptimizationForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) self.optimizationId = None self.parameters = None self.inputParameters = None self.outputParameters = None self.modelName = None self.submodelNames = None self.modifiedSubmodelNames = None self.optimizationStatus = None self.showGraph = None self.optimPath = None self.experiments = None self.experimentsData = None self.scoreTime = [] self.scoreValues = [] self.scoreRawValues = [] self.scoreMinEv = [] self.scoreMaxEv = [] self.optimizationModel = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) self.listOfSimulations = None self.fileUploadForm = DocumentForm()
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
self.listOfSpecies = None
self.listOfReactions = None
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingProject.__init__(self)
self.listOfSimulations = None
self.fileUploadForm = DocumentForm()
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
self.listOfUnitDefinitions = None
self.form = ModelUnitsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) self.computations = None self.computationsStatus = None self.conts = None self.optims = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) self.listOfSpecies = None self.listOfReactions = None self.listOfCompartments = None
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.modelHistory = None
self.modelPublication = None
self.form = ModelAnnotationsForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.listOfVariables = None
self.listOfEvents = None
self.form = ModelEventsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.listOfVariables = None self.listOfEvents = None self.form = ModelEventsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) HasUserLoggedIn.__init__(self) HasErrorMessages.__init__(self) self.listOfModels = None self.fileUploadForm = DocumentForm()
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingProject.__init__(self)
HasUserLoggedIn.__init__(self)
HasErrorMessages.__init__(self)
self.listOfModels = None
self.fileUploadForm = DocumentForm()
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingProject.__init__(self)
self.listOfExperiments = None
self.experimentId = None
self.experimentName = None
self.experimentNotes = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.modelHistory = None self.modelPublication = None self.form = ModelAnnotationsForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
HasErrorMessages.__init__(self)
self.listOfCompartments = None
self.listOfUnits = None
self.form = ModelCompartmentsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) HasErrorMessages.__init__(self) self.listOfCompartments = None self.listOfUnits = None self.form = ModelCompartmentsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) # init_printing() self.modelInstance = None self.latex_odes = [] self.latex_conslaws = [] self.latex_cfes = [] self.latex_daes = []
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) self.listOfExperiments = None self.experimentId = None self.experimentName = None self.experimentNotes = None self.fileUploadForm = DocumentForm()
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingProject.__init__(self)
self.listOfFolders = None
self.createFolderShow = None
self.createFolderError = None
self.sendFolderShow = None
self.sendFolderError = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) self.listOfFolders = None self.createFolderShow = None self.createFolderError = None self.sendFolderShow = None self.sendFolderError = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) HasErrorMessages.__init__(self) self.listOfConstants = None self.listOfVariables = None self.listComputations = None self.computation = None
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingProject.__init__(self)
self.experiment = None
self.listOfConditions = None
self.conditionId = None
self.conditionName = None
self.conditionNotes = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) HasErrorMessages.__init__(self) self.listOfConstants = None self.listComputations = None self.computation = None self.form = AnalyseBifurcationsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.listOfParameters = None self.listOfReactions = None self.listOfUnits = None self.form = ModelParametersForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.listOfParameters = None
self.listOfReactions = None
self.listOfUnits = None
self.form = ModelParametersForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
self.listOfUnitDefinitions = None
self.unitDefinition = None
self.listOfUnits = []
self.addingNewUnit = None
self.editingUnitDefinition = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.listOfUnits = None self.listOfParameters = None self.sbmlLevels = None self.modelHistory = None self.modelPublication = None self.form = ModelMiscForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.listOfUnits = None
self.listOfParameters = None
self.sbmlLevels = None
self.modelHistory = None
self.modelPublication = None
self.form = ModelMiscForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
self.listOfDataSets = None
self.selectedDataSets = None
self.selectedDataSetsIds = None
self.listOfSpecies = None
self.speciesMapping = None
self.selectedParameters = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.listOfReactions = None self.listOfSpecies = None self.listOfParameters = None self.listOfKineticLaws = None self.reactionTypes = KineticLaw.reactionTypes self.parametersList = KineticLaw.parametersList self.allowReversibleList = KineticLaw.allowReversibleList self.form = ModelReactionsForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.listOfReactions = None
self.listOfSpecies = None
self.listOfParameters = None
self.listOfKineticLaws = None
self.reactionTypes = KineticLaw.reactionTypes
self.parametersList = KineticLaw.parametersList
self.allowReversibleList = KineticLaw.allowReversibleList
self.form = ModelReactionsForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.listOfVariables = None self.listOfRules = None self.ruleTypes = ["Algebraic rule", "Assignment rule", "Rate rule", "Initial assignment"] self.form = ModelRulesForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.listOfVariables = None
self.listOfRules = None
self.ruleTypes = [
"Algebraic rule", "Assignment rule", "Rate rule",
"Initial assignment"
]
self.form = ModelRulesForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) self.experiment = None self.condition = None self.dataPoints = None self.treatmentPoints = None self.observations = None self.treatments = None self.observationForm = ObservationForm(self) self.treatmentForm = TreatmentForm(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) # "email_address": "*****@*****.**", # "email_use_tls": true, # "email_host": "smtp.gmail.com", # "email_port": "587", # "email_user": "******", # "email_password": "******", self.mailAddress = None self.mailUseTLS = None self.mailHost = None self.mailPort = None self.mailUser = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) self.experiment = None self.condition = None self.dataPoints = None self.treatmentPoints = None self.observations = None self.treatments = None self.observationForm = ObservationForm(self) self.treatmentForm = TreatmentForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
# "email_address": "*****@*****.**",
# "email_use_tls": true,
# "email_host": "smtp.gmail.com",
# "email_port": "587",
# "email_user": "******",
# "email_password": "******",
self.mailAddress = None
self.mailUseTLS = None
self.mailHost = None
self.mailPort = None
self.mailUser = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self) HasWorkingModel.__init__(self) self.listOfSubmodels = [] self.listOfSubmodelTypes = [] self.listOfSubstitutions = None self.listOfProjectModels = None self.listOfSubmodelsRefs = None self.listOfObjects = None self.listOfObjectsMetaIds = None self.listOfConversionFactors = None self.form = ModelSubmodelsForm(self) self.formSubstitutions = ModelSubmodelSubstitutionForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasErrorMessages.__init__(self)
HasWorkingModel.__init__(self)
self.listOfSubmodels = []
self.listOfSubmodelTypes = []
self.listOfSubstitutions = None
self.listOfProjectModels = None
self.listOfSubmodelsRefs = None
self.listOfObjects = None
self.listOfObjectsMetaIds = None
self.listOfConversionFactors = None
self.form = ModelSubmodelsForm(self)
self.formSubstitutions = ModelSubmodelSubstitutionForm(self)
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
SedmlWriter.__init__(self)
self.form = SteadyStateSimulationForm(self)
self.listOfVariables = None
self.listOfReactions = None
self.experiments = None
self.nbConditions = None
self.experimentName = None
self.observations = None
self.simResults = None
self.t_unit = None
self.y_unit = None
self.y_max = 0
self.conditionNames = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self) SedmlWriter.__init__(self) self.form = SteadyStateSimulationForm(self) self.listOfVariables = None self.listOfReactions = None self.experiments = None self.nbConditions = None self.experimentName = None self.observations = None self.simResults = None self.t_unit = None self.y_unit = None self.y_max = 0 self.conditionNames = None
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasWorkingModel.__init__(self)
self.form = TimeSeriesSimulationForm(self)
self.listOfVariables = None
self.listOfReactions = None
self.experiments = None
self.nbConditions = None
self.experimentName = None
self.observations = None
self.simulationResultsLoaded = None
self.ts = None
self.ys = None
self.simResults = None
self.t_unit = None
self.y_unit = None
self.y_max = 0
self.conditionNames = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self) HasErrorMessages.__init__(self) self.listOfPlots2D = None
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
self.install_done = False
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
self.form = SignUpForm(self)
def __init__(self):
TemplateView.__init__(self)
self.isAuthenticated = False
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingProject.__init__(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasErrorMessages.__init__(self)
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) self.install_done = False
def __init__(self):
TemplateView.__init__(self)
self.probes = None
self.outages = []
self.now = datetime.utcnow() - relativedelta(days=1)
def __init__(self, *args, **kwargs):
TemplateView.__init__(self, *args, **kwargs)
self.participant = None
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasUserLoggedIn.__init__(self, **kwargs) self.activated = False
def __init__(self, **kwargs):
TemplateView.__init__(self, **kwargs)
HasUserLoggedIn.__init__(self, **kwargs)
self.activated = False
def __init__(self, **kwargs): TemplateView.__init__(self, **kwargs) HasWorkingModel.__init__(self)
