def test_export_to_cyjs():
ca = CAGAssembler(statements)
ca.make_model()
cyjs = ca.export_to_cytoscapejs()
assert len(cyjs['nodes']) == 2
assert len(cyjs['edges']) == 1
ca.generate_jupyter_js()
def test_eidos_to_cag():
stmts = __get_stmts_from_remote_jsonld()
ca = CAGAssembler()
# Make sure these don't error
ca.add_statements(stmts)
ca.make_model()
ca.export_to_cytoscapejs()
return
def test_eidos_to_cag():
stmts = __get_stmts_from_remote_jsonld()
ca = CAGAssembler()
# Make sure these don't error
ca.add_statements(stmts)
ca.make_model()
ca.export_to_cytoscapejs()
return
def display_delphi(statements):
from delphi import app
ca = CAGAssembler(statements)
cag = ca.make_model()
cyjs = ca.export_to_cytoscapejs()
cyjs_str = json.dumps(cyjs)
app.state.statements = statements
app.state.CAG = cag
app.state.elementsJSON = cyjs
app.state.elementsJSONforJinja = cyjs_str
app.run()
def test_assemble_no_evidence():
ca = CAGAssembler([Influence(Event(Concept('a')), Event(Concept('b')))])
ca.make_model()
ca.generate_jupyter_js()
def test_assemble_influence():
ca = CAGAssembler(statements)
CAG = ca.make_model()
assert len(CAG.nodes()) == 2
assert len(CAG.edges()) == 1
def make_mitre_tsv(stmts, fname):
ca = CAGAssembler(stmts)
ca.make_model()
ca.print_tsv(fname)