sys.path.append(settings.ALLCELLS_PATH)
allcells = importlib.import_module(allcellsFileName)
numOfCells = len(
allcells.cellDB
) #number of cells that were clustered on all sessions clustered
outputDir = '/home/languo/data/ephys/' + subject + '/'
binWidth = 0.020 # Size of each bin in histogram in seconds
clusNum = 12 #Number of clusters that Klustakwik speparated into
numTetrodes = 8 #Number of tetrodes
CellInfo = celldatabase.CellInfo #This is for creating subdatabase for responsive and modulated cells
responsiveCellDB = celldatabase.CellDatabase()
nonModulatedCellDB = celldatabase.CellDatabase()
################################################################################################
##############################-----Minimum Requirements------###################################
################################################################################################
#qualityList = [1,6]#[1,4,5,6,7]#range(1,10)
minZVal = 3.0
#maxISIviolation = 0.02
minPValue = 0.05
################################################################################################
################################################################################################
subject = allcells.cellDB[0].animalName
behavSession = ''
processedDir = os.path.join(outputDir, subject + '_stats')
'''
List of all isolated units from one animal
'''
from jaratoolbox import celldatabase
eSession = celldatabase.EphysSessionInfo # Shorter name to simplify code
cellDB = celldatabase.CellDatabase()
'''
oneES = eSession(animalName='adap015',
ephysSession = '2016-03-16_10-04-37',
clustersEachTetrode = {1:range(1,13),2:range(1,13),3:range(1,13),4:range(1,13),5:range(1,13),6:range(1,13),7:range(1,13),8:range(1,13)},
behavSession = '20160316a')
cellDB.append_session(oneES)
oneES = eSession(animalName='adap015', #CRASHES BECAUSE SKIPPED TRIAL IS LAST TRIAL
ephysSession = '2016-03-03_14-27-14',
clustersEachTetrode = {1:range(1,13),2:range(1,13),3:range(1,13),4:range(1,13),5:range(1,13),6:range(1,13),7:range(1,13),8:range(1,13)},
behavSession = '20160303a')
cellDB.append_session(oneES)
oneES = eSession(animalName='adap015',
ephysSession = '2016-02-23_14-12-34',
clustersEachTetrode = {1:range(1,13),2:range(1,13),3:range(1,13),4:range(1,13),5:range(1,13),6:range(1,13),7:range(1,13),8:range(1,13)},
behavSession = '20160223a')
cellDB.append_session(oneES)
oneES = eSession(animalName='adap015',
ephysSession = '2016-02-18_14-53-11',
clustersEachTetrode = {1:range(1,13),2:range(1,13),3:range(1,13),4:range(1,13),5:range(1,13),6:range(1,13),7:range(1,13),8:range(1,13)},
behavSession = '20160218a')
sys.path.append(settings.ALLCELLS_PATH)
allcells = importlib.import_module(allcellsFileName)
numOfCells = len(
allcells.cellDB
) #number of cells that were clustered on all sessions clustered
outputDir = '/home/languo/data/ephys/' + subject + '/'
binWidth = 0.020 # Size of each bin in histogram in seconds
clusNum = 12 #Number of clusters that Klustakwik speparated into
numTetrodes = 8 #Number of tetrodes
CellInfo = celldatabase.CellInfo #This is for creating subdatabase for responsive and modulated cells
allCellDB = celldatabase.CellDatabase()
modulatedCellDB = celldatabase.CellDatabase()
################################################################################################
##############################-----Minimum Requirements------###################################
################################################################################################
qualityList = [1, 6] #[1,4,5,6,7]#range(1,10)
minZVal = 3.0
#maxISIviolation = 0.02
minPValue = 0.05
################################################################################################
################################################################################################
subject = allcells.cellDB[0].animalName
behavSession = ''
processedDir = os.path.join(outputDir, subject + '_stats')
