#
# Make sure it saves the information in the projectDir
# To do this on the Python level you have to reset the path
# for the urls that indicate the directory locations for the
# saved files...
#
# Alternatively create the project in the right directory to
# start with - see convertCns2Pdb
#
for repository in ccpnProject.repositories:
if repository.name in ('userData','backup'):
(oldUrlPath,baseName) = uniIo.splitPath((repository.url.path))
newUrlPath = uniIo.joinPath(projectDir,baseName)
repository.url = Implementation.Url(path = newUrlPath)
#
# Create main Tk window for popups
#
gui = Tkinter.Tk()
#
# Create an NmrView class and read in the files... create an experiment
# for the peak list beforehand and pass in the parameters.
#
def getObjDirName(self, metaObj, absoluteName=True):
fileName = self.getObjFileName(metaObj, absoluteName=absoluteName)
dirName = uniIo.splitPath(fileName)[0]
return dirName
#
# Make sure it saves the information in the projectDir
# To do this on the Python level you have to reset the path
# for the urls that indicate the directory locations for the
# saved files...
#
# Alternatively create the project in the right directory to
# start with - see convertCns2Pdb
#
for repository in ccpnProject.repositories:
if repository.name in ('userData', 'backup'):
(oldUrlPath, baseName) = uniIo.splitPath(repository.url.path)
newUrlPath = uniIo.joinPath(projectDir, baseName)
repository.url = Implementation.Url(path=newUrlPath)
#
# Open a Tk window for handling the popups...
#
root = Tkinter.Tk()
#
# Create the FormatConverter CnsFormat object
#
cnsFormat = CnsFormat(ccpnProject, root)
def findDataStoringFromFilepath(project,
fullFilePath,
preferDataUrls=None,
dataLocationStore=None,
keepDirectories=1):
""" Get DataUrl and relative filePath from normalised absolute filePath
Uses heuristics to select compatible DataUrl from existing ones.
sisterObjects is a collection of objects with a dataStore link -
DataUrls in use for sisterObjects are given preference in the
heuristics.
uses dataLocationStore or current dataLocationStore
If no compatible DataUrl is found the routine returns dataUrl None
and the file name plus the lowest keepDirectories directories
as the filePath
"""
# NB fullFilePath *must* be absolute her for code to work properly
#
if not os.path.isabs(fullFilePath):
raise ApiError(
"findDataStoringFromFilepath called with non-absolute file name %s"
% fullFilePath)
# get DataLocationStore
if not dataLocationStore:
setCurrentStore(project, 'DataLocationStore')
dataLocationStore = project.currentDataLocationStore
# get DataUrl that match fullFilePath
dataUrls = []
for dataUrl in dataLocationStore.dataUrls:
dirPath = uniIo.normalisePath(dataUrl.url.path)
if fullFilePath.startswith(dirPath):
lenPath = len(dirPath)
ss = fullFilePath
while len(ss) > lenPath:
ss, junk = uniIo.splitPath(ss)
if ss == dirPath:
# DataUrl path matches file path
dataUrls.append(dataUrl)
# process result
if dataUrls:
if preferDataUrls:
# look for DataUrls that are in use with related objects
ll = [x for x in dataUrls if x in preferDataUrls]
if ll:
dataUrls = ll
if len(dataUrls) == 1:
# only one DataUrl - use it
dataUrl = dataUrls[0]
else:
# use DataUrl with longest path
ll = [(len(dataUrl.url.path), dataUrl) for dataUrl in dataUrls]
ll.sort()
dataUrl = ll[-1][1]
# get filePath
ss = uniIo.joinPath(dataUrl.url.path,
'') # removes file separator from end
filePath = fullFilePath[len(ss) + 1:]
else:
dataUrl = None
ll = []
ss = fullFilePath
for dummy in range(keepDirectories + 1):
ss, name = os.path.split(ss)
ll.append(name)
ll.reverse()
filePath = uniIo.joinPath(*ll)
#
return (dataUrl, filePath)
