Ejemplo n.º 1
0
def end():
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        logger.debug("%s%s --> %s" % (population.label, variables, filename))
        io = recording.get_io(filename)
        population.write_data(io, variables)
    for tempdir in simulator.state.tempdirs:
        shutil.rmtree(tempdir)
    simulator.state.tempdirs = []
    simulator.state.write_on_end = []
Ejemplo n.º 2
0
def end():
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        logger.debug("%s%s --> %s" % (population.label, variables, filename))
        io = recording.get_io(filename)
        population.write_data(io, variables)
    for tempdir in simulator.state.tempdirs:
        shutil.rmtree(tempdir)
    simulator.state.tempdirs = []
    simulator.state.write_on_end = []
Ejemplo n.º 3
0
def end(compatible_output=True):
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        io = get_io(filename)
        population.write_data(io, variables)
    simulator.state.write_on_end = []
    electrodes.current_sources = []
    for item in simulator.state.network.groups + simulator.state.network._all_operations:
        del item
    del simulator.state
Ejemplo n.º 4
0
def end(compatible_output=True):
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        io = get_io(filename)
        population.write_data(io, variables)
    simulator.state.write_on_end = []
    electrodes.current_sources = []
    for item in simulator.state.network.groups + simulator.state.network._all_operations:
        del item
    del simulator.state
Ejemplo n.º 5
0
def end(_=True):
    """ Cleans up the SpiNNaker machine and software

    :param _: was named compatible_output, which we don't care about,\
        so is a non-existent parameter
    :rtype: None
    """
    for (population, variables, filename) in \
            globals_variables.get_simulator().write_on_end:
        io = get_io(filename)
        population.write_data(io, variables)
    globals_variables.get_simulator().write_on_end = []
    globals_variables.get_simulator().stop()
Ejemplo n.º 6
0
def end():
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        io_file = get_io(filename)
        population.write_data(io_file, variables)
    simulator.state.write_on_end = []

    if simulator.state.conn_manager is not None:
        simulator.state.conn_manager.__exit__()
        simulator.state.conn_manager = None
        assert simulator.state.conn is not None
        simulator.state.conn = None
    # remove instance singleton
    simulator.state = None
Ejemplo n.º 7
0
def end(_=True):
    """ Cleans up the SpiNNaker machine and software

    :param _: was named compatible_output, which we don't care about,
        so is a non-existent parameter
    """
    try:
        simulator = globals_variables.get_simulator()
    except SimulatorShutdownException:
        logger.warning("Second call to end ignored")
        return
    except SimulatorNotSetupException:
        logger.exception("Calling end before setup makes no sense ignoring!")
        return
    for (population, variables, filename) in \
            simulator.write_on_end:
        io = get_io(filename)
        population.write_data(io, variables)
    simulator.write_on_end = []
    simulator.stop()
Ejemplo n.º 8
0
def end(compatible_output=True):
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        io = get_io(filename)
        population.write_data(io, variables)
    simulator.state.write_on_end = []
Ejemplo n.º 9
0
def end(compatible_output=True):
    """Do any necessary cleaning up before exiting."""
    for (population, variables, filename) in simulator.state.write_on_end:
        io = get_io(filename)
        population.write_data(io, variables)
    simulator.state.write_on_end = []
Ejemplo n.º 10
0
plt.ion() #.rcParams['interactive'] = True

example = sys.argv[1]

blocks = {}
for simulator in 'MOCK', 'NEST', 'NEURON', 'Brian', 'MOOSE', 'Nemo':
    pattern = "Results/%s_*%s.*" % (example, simulator.lower())
    datafiles = glob.glob(pattern)
    if datafiles:
        for datafile in datafiles:
            base = os.path.basename(datafile)
            root = base[:base.find(simulator.lower())-1]
            if root not in blocks:
                blocks[root] = {}
            blocks[root][simulator] = get_io(datafile).read_block()
    else:
        print("No data found for pattern %s" % pattern)

print("-"*79)
print(example)
from pprint import pprint
pprint(blocks)

if len(blocks) > 0:
    for name in blocks:
        plt.figure()
        lw = 2*len(blocks[name]) - 1
        for simulator, block in blocks[name].items():
            vm = block.segments[0].filter(name="v")[0]
            plt.plot(vm.times, vm[:, 0], label=simulator, linewidth=lw)
Ejemplo n.º 11
0
plt.ion()  #.rcParams['interactive'] = True

example = sys.argv[1]

blocks = {}
for simulator in 'MOCK', 'NEST', 'NEURON', 'Brian', 'MOOSE', 'Nemo':
    pattern = "Results/%s_*%s.*" % (example, simulator.lower())
    datafiles = glob.glob(pattern)
    if datafiles:
        for datafile in datafiles:
            base = os.path.basename(datafile)
            root = base[:base.find(simulator.lower()) - 1]
            if root not in blocks:
                blocks[root] = {}
            blocks[root][simulator] = get_io(datafile).read_block()
    else:
        print("No data found for pattern %s" % pattern)

print("-" * 79)
print(example)
from pprint import pprint

pprint(blocks)

if len(blocks) > 0:
    for name in blocks:
        plt.figure()
        lw = 2 * len(blocks[name]) - 1
        for simulator, block in blocks[name].items():
            vm = block.segments[0].filter(name="v")[0]