def end():
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
logger.debug("%s%s --> %s" % (population.label, variables, filename))
io = recording.get_io(filename)
population.write_data(io, variables)
for tempdir in simulator.state.tempdirs:
shutil.rmtree(tempdir)
simulator.state.tempdirs = []
simulator.state.write_on_end = []
def end():
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
logger.debug("%s%s --> %s" % (population.label, variables, filename))
io = recording.get_io(filename)
population.write_data(io, variables)
for tempdir in simulator.state.tempdirs:
shutil.rmtree(tempdir)
simulator.state.tempdirs = []
simulator.state.write_on_end = []
def end(compatible_output=True):
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
io = get_io(filename)
population.write_data(io, variables)
simulator.state.write_on_end = []
electrodes.current_sources = []
for item in simulator.state.network.groups + simulator.state.network._all_operations:
del item
del simulator.state
def end(compatible_output=True):
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
io = get_io(filename)
population.write_data(io, variables)
simulator.state.write_on_end = []
electrodes.current_sources = []
for item in simulator.state.network.groups + simulator.state.network._all_operations:
del item
del simulator.state
def end(_=True):
""" Cleans up the SpiNNaker machine and software
:param _: was named compatible_output, which we don't care about,\
so is a non-existent parameter
:rtype: None
"""
for (population, variables, filename) in \
globals_variables.get_simulator().write_on_end:
io = get_io(filename)
population.write_data(io, variables)
globals_variables.get_simulator().write_on_end = []
globals_variables.get_simulator().stop()
def end():
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
io_file = get_io(filename)
population.write_data(io_file, variables)
simulator.state.write_on_end = []
if simulator.state.conn_manager is not None:
simulator.state.conn_manager.__exit__()
simulator.state.conn_manager = None
assert simulator.state.conn is not None
simulator.state.conn = None
# remove instance singleton
simulator.state = None
def end(_=True):
""" Cleans up the SpiNNaker machine and software
:param _: was named compatible_output, which we don't care about,
so is a non-existent parameter
"""
try:
simulator = globals_variables.get_simulator()
except SimulatorShutdownException:
logger.warning("Second call to end ignored")
return
except SimulatorNotSetupException:
logger.exception("Calling end before setup makes no sense ignoring!")
return
for (population, variables, filename) in \
simulator.write_on_end:
io = get_io(filename)
population.write_data(io, variables)
simulator.write_on_end = []
simulator.stop()
def end(compatible_output=True):
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
io = get_io(filename)
population.write_data(io, variables)
simulator.state.write_on_end = []
def end(compatible_output=True):
"""Do any necessary cleaning up before exiting."""
for (population, variables, filename) in simulator.state.write_on_end:
io = get_io(filename)
population.write_data(io, variables)
simulator.state.write_on_end = []
plt.ion() #.rcParams['interactive'] = True
example = sys.argv[1]
blocks = {}
for simulator in 'MOCK', 'NEST', 'NEURON', 'Brian', 'MOOSE', 'Nemo':
pattern = "Results/%s_*%s.*" % (example, simulator.lower())
datafiles = glob.glob(pattern)
if datafiles:
for datafile in datafiles:
base = os.path.basename(datafile)
root = base[:base.find(simulator.lower())-1]
if root not in blocks:
blocks[root] = {}
blocks[root][simulator] = get_io(datafile).read_block()
else:
print("No data found for pattern %s" % pattern)
print("-"*79)
print(example)
from pprint import pprint
pprint(blocks)
if len(blocks) > 0:
for name in blocks:
plt.figure()
lw = 2*len(blocks[name]) - 1
for simulator, block in blocks[name].items():
vm = block.segments[0].filter(name="v")[0]
plt.plot(vm.times, vm[:, 0], label=simulator, linewidth=lw)
plt.ion() #.rcParams['interactive'] = True
example = sys.argv[1]
blocks = {}
for simulator in 'MOCK', 'NEST', 'NEURON', 'Brian', 'MOOSE', 'Nemo':
pattern = "Results/%s_*%s.*" % (example, simulator.lower())
datafiles = glob.glob(pattern)
if datafiles:
for datafile in datafiles:
base = os.path.basename(datafile)
root = base[:base.find(simulator.lower()) - 1]
if root not in blocks:
blocks[root] = {}
blocks[root][simulator] = get_io(datafile).read_block()
else:
print("No data found for pattern %s" % pattern)
print("-" * 79)
print(example)
from pprint import pprint
pprint(blocks)
if len(blocks) > 0:
for name in blocks:
plt.figure()
lw = 2 * len(blocks[name]) - 1
for simulator, block in blocks[name].items():
vm = block.segments[0].filter(name="v")[0]