class AnalysisModifierTestCase(unittest.TestCase):
@classmethod
def setUpClass(cls):
src = os.path.join(get_data_dir(), 'opychrondata.db')
db = isotope_db_factory(src, remove=False)
with db.session_ctx():
ans = db.get_analyses()
cls.analyses = [MAnalysis(ai) for ai in ans]
cls.new_identifier = '2000'
def setUp(self):
maindb = pychron_source_factory()
sdb = massspec_source_factory()
self.modifier = AnalysisModifier(main_db=maindb, secondary_db=sdb)
def test_modifier_pychrondb(self):
self.modifier.use_main = True
self.modifier.use_secondary = False
an = self.analyses[0]
can = copy.copy(an)
can.identifier = self.new_identifier
self.modifier.modify_analyses([an], [can])
db = self.modifier.main_db
with db.session_ctx():
new_an = db.get_analysis_uuid(an.uuid)
self.assertEqual(new_an.labnumber.identifier, self.new_identifier)
def test_modifier_secondarydb(self):
self.modifier.use_main = False
self.modifier.use_secondary = True
an = self.analyses[0]
can = copy.copy(an)
can.identifier = self.new_identifier
self.modifier.modify_analyses([an], [can])
db = self.modifier.secondary_db
with db.session_ctx():
old_an = db.get_analysis(an.labnumber, an.aliquot, an.step)
self.assertIsNone(old_an)
new_an = db.get_analysis(self.new_identifier,
'{:02d}'.format(an.aliquot), an.step)
self.assertEqual(
new_an.RID, make_runid(self.new_identifier, an.aliquot,
an.step))
self.assertEqual(new_an.sample.Sample, 'Bar')
class AnalysisModifierTestCase(unittest.TestCase):
@classmethod
def setUpClass(cls):
src = os.path.join(get_data_dir(), 'opychrondata.db')
db = isotope_db_factory(src, remove=False)
with db.session_ctx():
ans = db.get_analyses()
cls.analyses = [MAnalysis(ai) for ai in ans]
cls.new_identifier = '2000'
def setUp(self):
maindb = pychron_source_factory()
sdb = massspec_source_factory()
self.modifier = AnalysisModifier(main_db=maindb,
secondary_db=sdb)
def test_modifier_pychrondb(self):
self.modifier.use_main = True
self.modifier.use_secondary = False
an = self.analyses[0]
can = copy.copy(an)
can.identifier = self.new_identifier
self.modifier.modify_analyses([an], [can])
db = self.modifier.main_db
with db.session_ctx():
new_an = db.get_analysis_uuid(an.uuid)
self.assertEqual(new_an.labnumber.identifier, self.new_identifier)
def test_modifier_secondarydb(self):
self.modifier.use_main = False
self.modifier.use_secondary = True
an = self.analyses[0]
can = copy.copy(an)
can.identifier = self.new_identifier
self.modifier.modify_analyses([an], [can])
db = self.modifier.secondary_db
with db.session_ctx():
old_an = db.get_analysis(an.labnumber, an.aliquot, an.step)
self.assertIsNone(old_an)
new_an = db.get_analysis(self.new_identifier, '{:02d}'.format(an.aliquot), an.step)
self.assertEqual(new_an.RID, make_runid(self.new_identifier, an.aliquot, an.step))
self.assertEqual(new_an.sample.Sample, 'Bar')
def setUp(self):
maindb = pychron_source_factory()
sdb = massspec_source_factory()
self.modifier = AnalysisModifier(main_db=maindb,
secondary_db=sdb)
def setUp(self):
maindb = pychron_source_factory()
sdb = massspec_source_factory()
self.modifier = AnalysisModifier(main_db=maindb, secondary_db=sdb)
