class AnalysisModifierTestCase(unittest.TestCase): @classmethod def setUpClass(cls): src = os.path.join(get_data_dir(), 'opychrondata.db') db = isotope_db_factory(src, remove=False) with db.session_ctx(): ans = db.get_analyses() cls.analyses = [MAnalysis(ai) for ai in ans] cls.new_identifier = '2000' def setUp(self): maindb = pychron_source_factory() sdb = massspec_source_factory() self.modifier = AnalysisModifier(main_db=maindb, secondary_db=sdb) def test_modifier_pychrondb(self): self.modifier.use_main = True self.modifier.use_secondary = False an = self.analyses[0] can = copy.copy(an) can.identifier = self.new_identifier self.modifier.modify_analyses([an], [can]) db = self.modifier.main_db with db.session_ctx(): new_an = db.get_analysis_uuid(an.uuid) self.assertEqual(new_an.labnumber.identifier, self.new_identifier) def test_modifier_secondarydb(self): self.modifier.use_main = False self.modifier.use_secondary = True an = self.analyses[0] can = copy.copy(an) can.identifier = self.new_identifier self.modifier.modify_analyses([an], [can]) db = self.modifier.secondary_db with db.session_ctx(): old_an = db.get_analysis(an.labnumber, an.aliquot, an.step) self.assertIsNone(old_an) new_an = db.get_analysis(self.new_identifier, '{:02d}'.format(an.aliquot), an.step) self.assertEqual( new_an.RID, make_runid(self.new_identifier, an.aliquot, an.step)) self.assertEqual(new_an.sample.Sample, 'Bar')
class AnalysisModifierTestCase(unittest.TestCase): @classmethod def setUpClass(cls): src = os.path.join(get_data_dir(), 'opychrondata.db') db = isotope_db_factory(src, remove=False) with db.session_ctx(): ans = db.get_analyses() cls.analyses = [MAnalysis(ai) for ai in ans] cls.new_identifier = '2000' def setUp(self): maindb = pychron_source_factory() sdb = massspec_source_factory() self.modifier = AnalysisModifier(main_db=maindb, secondary_db=sdb) def test_modifier_pychrondb(self): self.modifier.use_main = True self.modifier.use_secondary = False an = self.analyses[0] can = copy.copy(an) can.identifier = self.new_identifier self.modifier.modify_analyses([an], [can]) db = self.modifier.main_db with db.session_ctx(): new_an = db.get_analysis_uuid(an.uuid) self.assertEqual(new_an.labnumber.identifier, self.new_identifier) def test_modifier_secondarydb(self): self.modifier.use_main = False self.modifier.use_secondary = True an = self.analyses[0] can = copy.copy(an) can.identifier = self.new_identifier self.modifier.modify_analyses([an], [can]) db = self.modifier.secondary_db with db.session_ctx(): old_an = db.get_analysis(an.labnumber, an.aliquot, an.step) self.assertIsNone(old_an) new_an = db.get_analysis(self.new_identifier, '{:02d}'.format(an.aliquot), an.step) self.assertEqual(new_an.RID, make_runid(self.new_identifier, an.aliquot, an.step)) self.assertEqual(new_an.sample.Sample, 'Bar')
def setUp(self): maindb = pychron_source_factory() sdb = massspec_source_factory() self.modifier = AnalysisModifier(main_db=maindb, secondary_db=sdb)
def setUp(self): maindb = pychron_source_factory() sdb = massspec_source_factory() self.modifier = AnalysisModifier(main_db=maindb, secondary_db=sdb)