def prep_template_delete_req(prep_id, user_id):
"""Delete the prep template
Parameters
----------
prep_id : int
The prep template to update
user_id : str
The current user object id
Returns
-------
dict of str
{'status': status,
'message': message}
"""
exists = _check_prep_template_exists(int(prep_id))
if exists['status'] != 'success':
return exists
prep = PrepTemplate(int(prep_id))
access_error = check_access(prep.study_id, user_id)
if access_error:
return access_error
msg = ''
status = 'success'
try:
PrepTemplate.delete(prep.id)
except Exception as e:
msg = ("Couldn't remove prep template: %s" % str(e))
status = 'error'
return {'status': status,
'message': msg}
def prep_template_delete_req(prep_id, user_id):
"""Delete the prep template
Parameters
----------
prep_id : int
The prep template to update
user_id : str
The current user object id
Returns
-------
dict of str
{'status': status,
'message': message}
"""
exists = _check_prep_template_exists(int(prep_id))
if exists['status'] != 'success':
return exists
prep = PrepTemplate(int(prep_id))
access_error = check_access(prep.study_id, user_id)
if access_error:
return access_error
msg = ''
status = 'success'
try:
PrepTemplate.delete(prep.id)
except Exception as e:
msg = str(e)
status = 'error'
return {'status': status,
'message': msg}
def delete_prep_template(self, study, user, callback):
"""Delete the selected prep template
Parameters
----------
study : Study
The current study object
user : User
The current user object
callback : function
The callback function to call with the results once the processing
is done
"""
prep_template_id = int(self.get_argument('prep_template_id'))
prep_id = prep_template_id
try:
PrepTemplate.delete(prep_template_id)
msg = ("Prep template %d has been deleted" % prep_template_id)
msg_level = "success"
prep_id = None
except Exception as e:
msg = ("Couldn't remove prep template: %s" % str(e))
msg_level = "danger"
callback((msg, msg_level, 'prep_template_tab', prep_id, None))
def delete_prep_template(self, study, user, callback):
"""Delete the selected prep template
Parameters
----------
study : Study
The current study object
user : User
The current user object
callback : function
The callback function to call with the results once the processing
is done
"""
prep_template_id = int(self.get_argument('prep_template_id'))
prep_id = prep_template_id
try:
PrepTemplate.delete(prep_template_id)
msg = ("Prep template %d has been deleted" % prep_template_id)
msg_level = "success"
prep_id = None
except Exception as e:
msg = ("Couldn't remove prep template: %s" % str(e))
msg_level = "danger"
callback((msg, msg_level, 'prep_template_tab', prep_id, None))
def tearDown(self):
for fp in self._clean_up_files:
if exists(fp):
remove(fp)
study_id = self.new_study.id
for pt in self.new_study.prep_templates():
PrepTemplate.delete(pt.id)
if SampleTemplate.exists(study_id):
SampleTemplate.delete(study_id)
Study.delete(study_id)
def tearDown(self):
for fp in self._clean_up_files:
if exists(fp):
remove(fp)
study_id = self.new_study.id
for pt in self.new_study.prep_templates():
PrepTemplate.delete(pt.id)
if SampleTemplate.exists(study_id):
SampleTemplate.delete(study_id)
Study.delete(study_id)
