def test_things_that_need_simulate(self):
covers(["simulate", "getReactionRatesEx", "getRatesOfChangeEx", "getResultColumnLabel", "getMatrixNumRows"])
rrPython.simulate()
rrPython.getReactionRatesEx([1.0, 0.9, 0.8, 0.6])
rrPython.getRatesOfChangeEx([1.0, 0.9, 0.8, 0.6])
rrPython.getResultColumnLabel()
rrPython.getMatrixNumRows()
def test_load_and_simulate(self):
model = resource_filename('roadrunnerlib','data/feedback.xml')
rrPython.loadSBMLFromFile(model)
rrPython.simulate()
from roadrunnerlib import rrPython
from pkg_resources import resource_filename
import os
model = resource_filename('roadrunnerlib','data/feedback.xml')
sbml = rrPython.loadSBMLFromFile(model)
rrPython.setTimeStart(0.0)
rrPython.setTimeEnd(3.0)
rrPython.setNumPoints(20)
rrPython.setSteadyStateSelectionList("time S1 S2 S3 S4")
results = rrPython.simulate()
print results
from roadrunnerlib import rrPython
from pkg_resources import resource_filename
print 'RoadRunner Python'
print rrPython.getCopyright()
print 'Build on ' + rrPython.getBuildDate()
startTime = 0
endTime = 5
numPoints = 50
selList="time,S1,S2"
model = resource_filename('roadrunnerlib','data/test_1.xml')
result = rrPython.loadSBMLFromFile(model)
rrPython.setTimeStart(startTime)
rrPython.setTimeEnd(endTime)
rrPython.setNumPoints(numPoints)
rrPython.setTimeCourseSelectionList(selList)
k = rrPython.simulate()
print k