name = "jcvi"
classifiers = [
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: BSD License',
'Programming Language :: Python',
'Programming Language :: Python :: 2',
'Topic :: Scientific/Engineering :: Bio-Informatics',
]
# Use the helper
h = SetupHelper(initfile="__init__.py", readmefile="README.md")
h.check_version(name, majorv=2, minorv=7)
h.install_requirements(requires=["cython", "numpy"])
# Now these are available
import numpy as np
from Cython.Distutils import build_ext
# Start the show
ext_modules = [
Extension("jcvi.assembly.chic", ["assembly/chic.pyx"],
include_dirs=[np.get_include()],
extra_compile_args=["-O3"]),
Extension("jcvi.formats.cblast", ["formats/cblast.pyx"],
extra_compile_args=["-O3"])
]
setup(
'Development Status :: 4 - Beta',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: BSD License',
'Programming Language :: Python',
'Programming Language :: Python :: 2',
'Topic :: Scientific/Engineering :: Bio-Informatics',
]
# Use the helper
h = SetupHelper(initfile="jcvi/__init__.py", readmefile="README.md")
h.check_version(name, majorv=2, minorv=7)
setup_dir = op.abspath(op.dirname(__file__))
requirements = [
x.strip() for x in open(op.join(setup_dir, 'requirements.txt'))
]
h.install_requirements(requires=["cython", "numpy"])
# Now these are available
# Start the show
ext_modules = [
Extension("jcvi.assembly.chic", ["jcvi/assembly/chic.pyx"],
include_dirs=[np.get_include()],
extra_compile_args=["-O3"]),
Extension("jcvi.formats.cblast", ["jcvi/formats/cblast.pyx"],
extra_compile_args=["-O3"])
]
setup(
name=name,
author=h.author,
from setup_helper import SetupHelper
name = "bioway"
classifiers = [
'Development Status :: 0 - Beta',
'Intended Audience :: Science/Research',
'License :: WYB License',
'Programming Language :: Python',
'Programming Language :: Python :: 2',
'Topic :: Bio-Informatics',
]
# Use the helper
h = SetupHelper(initfile="__init__.py", readmefile="README.md")
h.check_version(name, majorv=2, minorv=7)
h.install_requirements(requires=[])
setup(
name=name,
author=h.author,
author_email=h.email,
version=h.version,
license=h.license,
long_description=h.long_description,
package_dir={name: '.'},
packages=[name] + ['.'.join((name, x)) for x in find_packages()],
include_package_data=True,
package_data={"bioway.utils.data": ["*.*"]},
classifiers=classifiers,
zip_safe=False,
url='http://github.come/wangyibin/bioway',
