def trimClusterNames(self, clusters):
trimmed = []
for cluster in clusters:
cluster = [getZmw(c) for c in cluster]
trimmed.append( frozenset(cluster) )
return trimmed
def trimClusterNames(self, clusters):
trimmed = []
for cluster in clusters:
cluster = [getZmw(c) for c in cluster]
trimmed.append(frozenset(cluster))
return trimmed
def parse_sequence_data(self):
self.sequenceData = {}
for fastqRecord in FastqReader( self.ccsFile ):
zmw = getZmw( fastqRecord.name )
self.sequenceData[zmw] = fastqRecord
def parse_sequence_data(self):
self.sequenceData = {}
for fastqRecord in FastqReader(self.ccsFile):
zmw = getZmw(fastqRecord.name)
self.sequenceData[zmw] = fastqRecord
