def trimClusterNames(self, clusters): trimmed = [] for cluster in clusters: cluster = [getZmw(c) for c in cluster] trimmed.append( frozenset(cluster) ) return trimmed
def trimClusterNames(self, clusters): trimmed = [] for cluster in clusters: cluster = [getZmw(c) for c in cluster] trimmed.append(frozenset(cluster)) return trimmed
def parse_sequence_data(self): self.sequenceData = {} for fastqRecord in FastqReader( self.ccsFile ): zmw = getZmw( fastqRecord.name ) self.sequenceData[zmw] = fastqRecord
def parse_sequence_data(self): self.sequenceData = {} for fastqRecord in FastqReader(self.ccsFile): zmw = getZmw(fastqRecord.name) self.sequenceData[zmw] = fastqRecord