inputFile = './data/7.convolutional_seq_data-1.txt'
#inputFile = 'C:/Users/Ashis/Downloads/dataset_104_7.txt'
outputFile = './results/7.convolutional_seq.txt'
# set current directory
os.chdir(curDir)
# read input
with open(inputFile) as f:
M = int(f.readline().strip())
N = int(f.readline().strip())
spectrumLine = f.readline().strip()
spectrum = [int(n) for n in spectrumLine.split(" ")]
# load SeqUtil methods
sys.path.append('code')
import SeqUtil
importlib.reload(SeqUtil)
### original work ####
# generate sequence from spectrum
seq = SeqUtil.convolutionCyclopeptideSequencing(spectrum, M, N)
# output
with open(outputFile, "w") as f:
f.writelines("-".join([str(s) for s in seq]))
