Python EDPluginXDSv1_0 Examples

Example #1

File: EDPluginXDSIndexingv1_0.py Project: olofsvensson/edna-plugins-mx

 def configure(self):
     EDPluginXDSv1_0.configure(self)
     EDVerbose.DEBUG("EDPluginXDSIndexingv1_0.configure")
     self.addJob("XYCORR")
     self.addJob("INIT")
     self.addJob("COLSPOT")
     self.addJob("IDXREF")

Example #2

File: EDPluginXDSGenerateBackgroundImagev1_0.py Project: yayahjb/edna-mx

 def __init__(self):
     EDPluginXDSv1_0.__init__(self)
     self.setXSDataInputClass(XSDataInputXDSGenerateBackgroundImage)
     self.dataOutput = XSDataResultXDSGenerateBackgroundImage()
     self.addJob("XYCORR")
     self.addJob("INIT")
     self.addJob("COLSPOT")

Example #3

 def configure(self):
     EDPluginXDSv1_0.configure(self)
     self.DEBUG("EDPluginXDSIndexingv1_0.configure")
     self.addJob("XYCORR")
     self.addJob("INIT")
     self.addJob("COLSPOT")
     self.addJob("IDXREF")

Example #4

File: EDPluginXDSGenerateBackgroundImagev1_0.py Project: yayahjb/edna-mx

 def postProcess(self, _edObject=None):
     EDPluginXDSv1_0.postProcess(self, _edObject)
     self.DEBUG("EDPluginXDSGenerateBackgroundImagev1_0.postProcess")
     xsDataResultXDSGenerateBackgroundImage = XSDataResultXDSGenerateBackgroundImage()
     strPathToXdsBackgroundImage = os.path.join(self.getWorkingDirectory(), "BKGINIT.cbf")
     if os.path.exists(strPathToXdsBackgroundImage):
         xsDataResultXDSGenerateBackgroundImage.setXdsBackgroundImage(XSDataFile(XSDataString(strPathToXdsBackgroundImage)))
     self.setDataOutput(xsDataResultXDSGenerateBackgroundImage)

Example #5

    def postProcess(self, _edObject=None):
        EDPluginXDSv1_0.postProcess(self)
        self.DEBUG("EDPluginXDSIntegrationv1_0.postProcess")

        correctLp = os.path.join(self.getWorkingDirectory(), "CORRECT.LP")
        if os.path.exists(correctLp):
            self.dataOutput.correctLp = XSDataFile(XSDataString(correctLp))

        bkgpixCbf = os.path.join(self.getWorkingDirectory(), "BKGPIX.cbf")
        if os.path.exists(bkgpixCbf):
            self.dataOutput.bkgpixCbf = XSDataFile(XSDataString(bkgpixCbf))

        xdsAsciiHkl = os.path.join(self.getWorkingDirectory(), "XDS_ASCII.HKL")
        if os.path.exists(xdsAsciiHkl):
            self.dataOutput.xdsAsciiHkl = XSDataFile(XSDataString(xdsAsciiHkl))

Example #6

File: EDPluginXDSIntegrationv1_0.py Project: IvarsKarpics/edna-mx

    def postProcess(self, _edObject=None):
        EDPluginXDSv1_0.postProcess(self)
        self.DEBUG("EDPluginXDSIntegrationv1_0.postProcess")

        correctLp = os.path.join(self.getWorkingDirectory(), "CORRECT.LP")
        if os.path.exists(correctLp):
            self.dataOutput.correctLp = XSDataFile(XSDataString(correctLp))

        bkgpixCbf = os.path.join(self.getWorkingDirectory(), "BKGPIX.cbf")
        if os.path.exists(bkgpixCbf):
            self.dataOutput.bkgpixCbf = XSDataFile(XSDataString(bkgpixCbf))

        xdsAsciiHkl = os.path.join(self.getWorkingDirectory(), "XDS_ASCII.HKL")
        if os.path.exists(xdsAsciiHkl):
            self.dataOutput.xdsAsciiHkl = XSDataFile(XSDataString(xdsAsciiHkl))

Example #7

File: EDPluginXDSIndexingv1_0.py Project: olofsvensson/edna-plugins-mx

 def __init__(self):
     EDPluginXDSv1_0.__init__(self)
     self.setXSDataInputClass(XSDataInputXDSIndexing)

Example #8

 def postProcess(self, _edObject=None):
     EDPluginXDSv1_0.postProcess(self)
     self.DEBUG("EDPluginXDSIndexingv1_0.postProcess")
     pathToIdxrefLp = os.path.join(self.getWorkingDirectory(), "IDXREF.LP")
     self.dataOutput = self.readIdxrefLp(pathToIdxrefLp, self.dataOutput)

Example #9

 def __init__(self):
     EDPluginXDSv1_0.__init__(self)
     self.setXSDataInputClass(XSDataInputXDSIndexing)
     self.dataOutput = XSDataResultXDSIndexing()

Example #10

File: EDPluginXDSIndexingv1_0.py Project: rentreg/edna

 def __init__(self):
     EDPluginXDSv1_0.__init__(self)
     self.setXSDataInputClass(XSDataInputXDSIndexing)

Example #11

 def configure(self):
     EDPluginXDSv1_0.configure(self)
     self.DEBUG("EDPluginXDSIntegrationv1_0.configure")
     self.addJob("DEFPIX")
     self.addJob("INTEGRATE")
     self.addJob("CORRECT")

Example #12

 def __init__(self):
     EDPluginXDSv1_0.__init__(self)
     self.setXSDataInputClass(XSDataInputXDSIntegration)
     self.dataOutput = XSDataResultXDSIntegration()

Example #13

File: EDPluginXDSIntegrationv1_0.py Project: IvarsKarpics/edna-mx

 def configure(self):
     EDPluginXDSv1_0.configure(self)
     self.DEBUG("EDPluginXDSIntegrationv1_0.configure")
     self.addJob("DEFPIX")
     self.addJob("INTEGRATE")
     self.addJob("CORRECT")

Example #14

File: EDPluginXDSIntegrationv1_0.py Project: IvarsKarpics/edna-mx

 def __init__(self):
     EDPluginXDSv1_0.__init__(self)
     self.setXSDataInputClass(XSDataInputXDSIntegration)
     self.dataOutput = XSDataResultXDSIntegration()