def map_to_owl(json_data):
for d in json_data:
"""mapping json data to ontology properties"""
# instance 实例
name = Preprocessor.name_underline(d['name'])
toolClass = tool_class(d['name'])
tool = toolClass(name, prefLabel=locstr(d['name'], lang='en'))
tool.isToolOfSoftware.append(cyber.TauDEM)
tool.identifier = name
description = OWLUtils.join_list(d['description'])
keywords = OWLUtils.to_keywords(description)
keywords.extend(name.replace('_', ' ').split(' '))
# keywords=name.replace('_', ' ').split(' ')
OWLUtils.link_to_domain_concept(tool, keywords)
for k, v in d.items():
# 外层, 参数
if (k in ['parameters', 'options']) and type(v) == list:
for i, item in enumerate(v):
param = None
# localname = v[i]['parameterName']
localname = Preprocessor.space_2_underline(item['parameterName'])
_label = localname.replace('_', ' ')
if item['isInputFile']:
param = TauDEMInput(localname, prefLabel=locstr(_label, lang='en'))
# param = TauDEMInput(prefLabel=locstr(_label, lang='en'))
# input geo data ? rule: format-> geoformat->geo data
tool.input.append(param)
handle_params(param, item)
param.isInput = True
elif item['isOutputFile']: # localname.lower().startswith('output_', 0, len('output_')):
param = TauDEMOutput(localname, prefLabel=locstr(_label, lang='en'))
# param = TauDEMOutput(prefLabel=locstr(_label, lang='en'))
tool.output.append(param)
handle_params(param, item)
param.isOutput = True
else:
param = TauDEMOption(localname, prefLabel=locstr(_label, lang='en'))
# param = TauDEMOption(prefLabel=locstr(localname.replace('_', ' '), lang='en'))
tool.option.append(param)
handle_params(param, item)
OWLUtils.link_to_domain_concept(param, _label)
param.identifier = localname
else:
prop = get_property(k, DataProperty)
if not v:
continue
if type(v) == list and len(v) > 0:
v = ''.join(v)
OWLUtils.set_data_property(tool, prop, v)
# task
handle_task(tool, name, d['name'], description)
OWLUtils.application_category(tool, 'Geomorphometry', 'digital terrain analysis', 'hydrology')
def handle_task(tool, task_name, des):
config = OWLUtils.get_config(module_path + '/config.ini')
category = tool_class(task_name)
task_cls = config.get('task', category.name)
task_name = Preprocessor.space_2_underline(task_name.replace(".py", ""))
if not task[task_name + "_task"]:
task_ins = task[task_cls](task_name + "_task", prefLabel=locstr(task_name + " task", lang='en'))
task_ins.isAtomicTask = True
task_ins.identifier = task_name
else:
task_ins = task[task_name + "_task"]
if (task_ins in tool.usedByTask) is False:
tool.usedByTask.append(task_ins)
if (tool in tool.processingTool) is False:
task_ins.processingTool.append(tool)
task_ins.description.append(locstr(des, lang='en'))
def map_to_owl(json_data):
for d in json_data:
name = d['name']
toolClass = tool_class(name)
name = Preprocessor.space_2_underline(name)
tool = toolClass(name, prefLabel=locstr(name, lang='en'))
tool.isToolOfSoftware.append(cyber.GDAL)
tool.identifier = name
tool.definition = d['summary']
tool.manualPageURL.append(d['manual_url'])
tool.executable = d['exec']
tool.commandLine.append(d['syntax'])
tool.description.append(locstr(d['description'], lang='en'))
OWLUtils.application_category(tool, [], ['GIS Analysis'], [str(toolClass.name).replace('Programs', '')])
keywords = OWLUtils.to_keywords(d['description'])
OWLUtils.link_to_domain_concept(tool, keywords)
for example in d['example']:
tool.example.append(example)
handle_task(tool, d['name'], d['description'])
for parameter in d['parameters']:
handle_parameter(tool, parameter)
for option in d['options']:
handle_options(tool, option, onto)