Python RunSnpDetection.all_data_filled Examples

Example #1

File: test_bohra.py Project: pansapiens/bohra

def test_with_missing():
        '''
        return False if missing data present
        '''
        with patch.object(RunSnpDetection, "__init__", lambda x: None):
                detect_obj = RunSnpDetection()
                tab = pandas.DataFrame({'A':[1,2,4, numpy.nan], 'B':[5,6,7,8], 'C':[9,10,11,12]})
                assert detect_obj.all_data_filled(tab) == False

Example #2

File: test_bohra.py Project: pansapiens/bohra

def test_missing():
        '''
        a full dataframe returns true
        '''
        with patch.object(RunSnpDetection, "__init__", lambda x: None):
                detect_obj = RunSnpDetection()
                tab = pandas.DataFrame({'A':[1,2,3,4], 'B':[5,6,7,8], 'C':[9,10,11,12]})
                assert detect_obj.all_data_filled(tab)