def parser(): parser = ArgumentParser(formatter_class=ArgumentDefaultsHelpFormatter) parser = curation_parser(parser) parser = cellfinder_parse.pixel_parser(parser) parser = cellfinder_parse.misc_parse(parser) parser = cellfinder_parse.cube_extract_parse(parser) return parser
def region_summary_cli_parser(): parser = argparse.ArgumentParser( formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser = cli_parse(parser) parser = cellfinder_parse.count_summary_parse(parser) parser = cellfinder_parse.pixel_parser(parser) return parser
def cells_standard_space_cli_parser(): parser = ArgumentParser(formatter_class=ArgumentDefaultsHelpFormatter) parser = cli_parse(parser) parser = cellfinder_parse.pixel_parser(parser) parser = cellfinder_parse.standard_space_parse(parser) parser = cellfinder_parse.misc_parse(parser) return parser