def _testPrintSequenceFromPdbFile(self):
entryId = "1brv" # Small much studied PDB NMR entry
# entryId = "1hy8" # small, single model, very low scoring entry
pdbDirectory = os.path.join(cingDirTestsData,"pdb", entryId)
pdbFileName = "pdb"+entryId+".ent"
fn = os.path.join( pdbDirectory, pdbFileName)
self.failIf( os.chdir(cingDirTmp), msg=
"Failed to change to directory for temporary test files: "+cingDirTmp)
self.assertFalse(printSequenceFromPdbFile(fn))
def _testPrintSequenceFromPdbFile(self):
entryId = "1brv" # Small much studied PDB NMR entry
# entryId = "1hy8" # small, single model, very low scoring entry
pdbDirectory = os.path.join(cingDirTestsData,"pdb", entryId)
pdbFileName = "pdb"+entryId+".ent"
fn = os.path.join( pdbDirectory, pdbFileName)
self.failIf( os.chdir(cingDirTmp), msg=
"Failed to change to directory for temporary test files: "+cingDirTmp)
self.assertFalse(printSequenceFromPdbFile(fn))
def reportDifference(ccpnProject, fn):
printSequenceFromCcpnProject(ccpnProject)
printSequenceFromPdbFile(fn)
