if "r" in MODELS:
thisMarker.stdTDT("r")
outputColumns.extend([str(thisMarker.chiSq_StdTDT),str(thisMarker.pValue_StdTDT)])
#RECESSIVE mi-TDT----------------------------------------------------------------------------
if VERSION == "scan" or VERSION == "":
thisMarker.extendedTDT("r")
outputColumns.extend([str(thisMarker.minChiSq_rTDT),str(thisMarker.minPValue_rTDT),str(thisMarker.maxChiSq_rTDT),str(thisMarker.maxPValue_rTDT)])
if TEST == "" or TEST == "fbat":
#ADDITIVE std. FBAT-------------------------------------------------------------------
if not MODELS or "a" in MODELS:
thisMarker.stdFBAT("a",OFFSET)
outputColumns.extend([str(thisMarker.Z_stdFBAT),str(thisMarker.pValue_stdFBAT)])
#ADDITIVE ext-FBAT------------------------------
if VERSION == "scan" or VERSION == "":
thisMarker.extendedFBAT("a",OFFSET)
outputColumns.extend([str(thisMarker.minZ_extFBAT),str(thisMarker.minPValue_extFBAT),str(thisMarker.maxZ_extFBAT),str(thisMarker.maxPValue_extFBAT)])
#DOMINANT std. FBAT-------------------------------------------------------------------
if "d" in MODELS:
thisMarker.stdFBAT("d",OFFSET)
outputColumns.extend([str(thisMarker.Z_stdFBAT),str(thisMarker.pValue_stdFBAT)])
#DOMINANT ext-FBAT------------------------------
if VERSION == "scan" or VERSION == "":
thisMarker.extendedFBAT("d",OFFSET)
outputColumns.extend([str(thisMarker.minZ_extFBAT),str(thisMarker.minPValue_extFBAT),str(thisMarker.maxZ_extFBAT),str(thisMarker.maxPValue_extFBAT)])
#RECESSIVE std. FBAT-------------------------------------------------------------------
if "r" in MODELS:
thisMarker.stdFBAT("r",OFFSET)
outputColumns.extend([str(thisMarker.Z_stdFBAT),str(thisMarker.pValue_stdFBAT)])
if "r" in MODELS:
thisMarker.stdTDT("r")
outputColumns.extend([str(thisMarker.chiSq_StdTDT),str(thisMarker.pValue_StdTDT)])
#RECESSIVE mi-TDT----------------------------------------------------------------------------
if VERSION == "ext" or VERSION == "":
thisMarker.extendedTDT("r")
outputColumns.extend([str(thisMarker.minChiSq_rTDT),str(thisMarker.minPValue_rTDT),str(thisMarker.maxChiSq_rTDT),str(thisMarker.maxPValue_rTDT)])
if TEST == "" or TEST == "fbat":
#ADDITIVE std. FBAT-------------------------------------------------------------------
if not MODELS or "a" in MODELS:
thisMarker.stdFBAT("a",OFFSET)
outputColumns.extend([str(thisMarker.Z_stdFBAT),str(thisMarker.pValue_stdFBAT)])
#ADDITIVE ext-FBAT------------------------------
if VERSION == "ext" or VERSION == "":
thisMarker.extendedFBAT("a",OFFSET,RUNS,ALPHA)
outputColumns.extend([str(thisMarker.ConfIntervalZ),str(thisMarker.ConfIntervalPValues)])
#DOMINANT std. FBAT-------------------------------------------------------------------
if "d" in MODELS:
thisMarker.stdFBAT("d",OFFSET)
outputColumns.extend([str(thisMarker.Z_stdFBAT),str(thisMarker.pValue_stdFBAT)])
#DOMINANT ext-FBAT------------------------------
if VERSION == "ext" or VERSION == "":
thisMarker.extendedFBAT("d",OFFSET,RUNS,ALPHA)
outputColumns.extend([str(thisMarker.ConfIntervalZ),str(thisMarker.ConfIntervalPValues)])
#RECESSIVE std. FBAT-------------------------------------------------------------------
if "r" in MODELS:
thisMarker.stdFBAT("r",OFFSET)
outputColumns.extend([str(thisMarker.Z_stdFBAT),str(thisMarker.pValue_stdFBAT)])
