def test_update_counter_from_dictionaries(self):
# start with empty dictionary
new_Blast = RunBlast(records=self.record_index, e_value=self.e_threshold,
wdir=self.Blast_dir, outfile="BlastOut")
expected = dict({"GO:01": 1,
"GO:03": 2,
"GO:04": 2,
"GO:05": 1, })
new_dict = new_Blast.init_dict(self.template_set_small, 0)
new_Blast.update_counter_from_dictionaries(new_dict, self.template_set_small)
# print(new_dict)
self.assertEqual(expected, new_dict)
expected = dict({"GO:01": 3,
"GO:02": 1,
"GO:03": 2,
"GO:04": 2,
"GO:05": 2,
"GO:06": 1,
"GO:07": 1})
new_dict = new_Blast.init_dict(self.template_set, 0)
new_Blast.update_counter_from_dictionaries(new_dict, self.template_set)
self.assertEqual(expected, new_dict)
def test_init_dict(self): # allterms, default_value=0)
expected = dict({"GO:01": 0,
"GO:03": 0,
"GO:04": 0,
"GO:05": 0,
})
new_dict = RunBlast(records=self.record_index, e_value=self.e_threshold,
wdir=self.Blast_dir, outfile="BlastOut")
default_dict = new_dict.init_dict(self.template_set_small, 0)
self.assertEqual(expected, default_dict)