def create_action(self, id_scope=None): from core.vistrail.action import Action from core.vistrail.module import Module from core.vistrail.module_function import ModuleFunction from core.vistrail.module_param import ModuleParam from core.vistrail.operation import AddOp from db.domain import IdScope from datetime import datetime if id_scope is None: id_scope = IdScope() param = ModuleParam(id=id_scope.getNewId(ModuleParam.vtType), type='Integer', val='1') function = ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value', parameters=[param]) m = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic', functions=[function]) add_op = AddOp(id=id_scope.getNewId('operation'), what='module', objectId=m.id, data=m) action = Action(id=id_scope.getNewId(Action.vtType), prevId=0, date=datetime(2007,11,18), operations=[add_op]) return action
def create_action(self, id_scope=None): from core.vistrail.action import Action from core.vistrail.module import Module from core.vistrail.module_function import ModuleFunction from core.vistrail.module_param import ModuleParam from core.vistrail.operation import AddOp from db.domain import IdScope from datetime import datetime if id_scope is None: id_scope = IdScope() param = ModuleParam(id=id_scope.getNewId(ModuleParam.vtType), type='Integer', val='1') function = ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value', parameters=[param]) m = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic', functions=[function]) add_op = AddOp(id=id_scope.getNewId('operation'), what='module', objectId=m.id, data=m) action = Action(id=id_scope.getNewId(Action.vtType), prevId=0, date=datetime(2007, 11, 18), operations=[add_op]) return action
def create_module(self, id_scope=None): from db.domain import IdScope if id_scope is None: id_scope = IdScope() params = [ModuleParam(id=id_scope.getNewId(ModuleParam.vtType), type='Int', val='1')] functions = [ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value', parameters=params)] module = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic', functions=functions) return module
def create_annotation(self, id_scope=None): from db.domain import IdScope if id_scope is None: id_scope = IdScope() annotation = Annotation(id=id_scope.getNewId(Annotation.vtType), key='akey %s', value='some value %s') return annotation
def create_annotation(self, id_scope=None): from db.domain import IdScope if id_scope is None: id_scope = IdScope() annotation = Annotation(id=id_scope.getNewId(Annotation.vtType), key='akey %s', value='some value %s') return annotation
def create_annotation(self, id_scope=None): from db.domain import IdScope if id_scope is None: id_scope = IdScope() annotation = \ ActionAnnotation(id=id_scope.getNewId(ActionAnnotation.vtType), key='akey', action_id=1L, value='some value', user='******') return annotation
def create_annotation(self, id_scope=None): from db.domain import IdScope if id_scope is None: id_scope = IdScope() annotation = \ ActionAnnotation(id=id_scope.getNewId(ActionAnnotation.vtType), key='akey', action_id=1L, value='some value', user='******') return annotation
def create_module(self, id_scope=None): from db.domain import IdScope if id_scope is None: id_scope = IdScope() params = [ ModuleParam(id=id_scope.getNewId(ModuleParam.vtType), type='Int', val='1') ] functions = [ ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value', parameters=params) ] module = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic', functions=functions) return module
def create_ops(self, id_scope=IdScope()): from core.vistrail.module import Module from core.vistrail.module_function import ModuleFunction from core.vistrail.module_param import ModuleParam from core.vistrail.annotation import Annotation if id_scope is None: id_scope = IdScope( remap={ AddOp.vtType: 'operation', ChangeOp.vtType: 'operation', DeleteOp.vtType: 'operation' }) m = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic') add_op = AddOp(id=id_scope.getNewId(AddOp.vtType), what=Module.vtType, objectId=m.id, data=m) function = ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value') change_op = ChangeOp(id=id_scope.getNewId(ChangeOp.vtType), what=ModuleFunction.vtType, oldObjId=2, newObjId=function.real_id, parentObjId=m.id, parentObjType=Module.vtType, data=function) param = ModuleParam(id=id_scope.getNewId(ModuleParam.vtType), type='Float', val='1.0') delete_op = DeleteOp(id=id_scope.getNewId(DeleteOp.vtType), what=ModuleParam.vtType, objectId=param.real_id, parentObjId=function.real_id, parentObjType=ModuleFunction.vtType) annotation = Annotation(id=id_scope.getNewId(Annotation.vtType), key='foo', value='bar') add_annotation = AddOp(id=id_scope.getNewId(AddOp.vtType), what=Annotation.vtType, objectId=m.id, data=annotation) return [add_op, change_op, delete_op, add_annotation]
def create_ops(self, id_scope=IdScope()): from core.vistrail.module import Module from core.vistrail.module_function import ModuleFunction from core.vistrail.module_param import ModuleParam from core.vistrail.annotation import Annotation if id_scope is None: id_scope = IdScope(remap={AddOp.vtType: 'operation', ChangeOp.vtType: 'operation', DeleteOp.vtType: 'operation'}) m = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic') add_op = AddOp(id=id_scope.getNewId(AddOp.vtType), what=Module.vtType, objectId=m.id, data=m) function = ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value') change_op = ChangeOp(id=id_scope.getNewId(ChangeOp.vtType), what=ModuleFunction.vtType, oldObjId=2, newObjId=function.real_id, parentObjId=m.id, parentObjType=Module.vtType, data=function) param = ModuleParam(id=id_scope.getNewId(ModuleParam.vtType), type='Float', val='1.0') delete_op = DeleteOp(id=id_scope.getNewId(DeleteOp.vtType), what=ModuleParam.vtType, objectId=param.real_id, parentObjId=function.real_id, parentObjType=ModuleFunction.vtType) annotation = Annotation(id=id_scope.getNewId(Annotation.vtType), key='foo', value='bar') add_annotation = AddOp(id=id_scope.getNewId(AddOp.vtType), what=Annotation.vtType, objectId=m.id, data=annotation) return [add_op, change_op, delete_op, add_annotation]
def create_abstraction(self, id_scope=None): from core.vistrail.action import Action from core.vistrail.module import Module from core.vistrail.module_function import ModuleFunction from core.vistrail.module_param import ModuleParam from core.vistrail.operation import AddOp from core.vistrail.tag import Tag from db.domain import IdScope from datetime import datetime if id_scope is None: id_scope = IdScope() function = ModuleFunction(id=id_scope.getNewId(ModuleFunction.vtType), name='value') m = Module(id=id_scope.getNewId(Module.vtType), name='Float', package='edu.utah.sci.vistrails.basic', functions=[function]) add_op = AddOp(id=id_scope.getNewId('operation'), what='module', objectId=m.id, data=m) add_op2 = AddOp(id=id_scope.getNewId('operation'), what='function', objectId=function.id, data=function) action = Action(id=id_scope.getNewId(Action.vtType), prevId=0, date=datetime(2007,11, 18), operations=[add_op, add_op2]) tag = Tag(id=id_scope.getNewId(Tag.vtType), name='a tag') abstraction = Abstraction(id=id_scope.getNewId(Abstraction.vtType), name='blah', actions=[action], tags=[tag]) return abstraction
def createMashupController(self, vt_controller, version, view=DummyView()): # print "Manager creating mashup controller ", vt_controller, version newvt_controller = MashupsManager.copyVistrailController(vt_controller, view) mashuptrail = MashupsManager.getMashuptrailforVersionInVistrailController(vt_controller, version) if mashuptrail is None: (p_mashuptrail, p_version) = MashupsManager.findClosestParentMashuptrail(vt_controller, version) id_scope = IdScope(1L) if p_mashuptrail is not None: version_name = vt_controller.get_pipeline_name(p_version) (res, mshpv) = MashupsManager.showFoundMashupsDialog(p_mashuptrail, version_name) if res in ["Copy", "Move"]: pipeline = newvt_controller.vistrail.getPipeline(version) if res == "Copy": # we will copy the mashup from the parent trail and # validate it to the current pipeline before adding # to the current mashup trail mashuptrail = Mashuptrail(self.getNewMashuptrailId(), version, id_scope) p_mashup = p_mashuptrail.getMashup(mshpv) mashup = p_mashup.doCopy() mashup.id_scope = id_scope mashup.version = version mashup.validateForPipeline(pipeline) currVersion = mashuptrail.addVersion( parent_id=mashuptrail.getLatestVersion(), mashup=mashup, user=core.system.current_user(), date=core.system.current_time(), ) mashuptrail.currentVersion = currVersion mashuptrail.updateIdScope() p_tag = p_mashuptrail.getTagForActionId(mshpv) if p_tag == "": tag = "<latest>" tag = "Copy from %s" % p_tag MashupsManager.addMashuptrailtoVistrailController(vt_controller, mashuptrail) elif res == "Move": # we will move the parent trail and validate all mashups # for the current pipeline to make sure they will be # executable for the current version mashuptrail = p_mashuptrail currVersion = mashuptrail.getLatestVersion() mashuptrail.currentVersion = currVersion mashuptrail.validateMashupsForPipeline(version, pipeline) tag = None mashuptrail.vtVersion = version mshpController = MashupController(vt_controller, newvt_controller, version, mashuptrail) mshpController.setCurrentVersion(mashuptrail.currentVersion) # this is to make sure the pipeline displayed in the mashup # view is consistent with the list of aliases in the central # panel mshpController.updatePipelineAliasesFromCurrentMashup() if tag is not None: mshpController.updateCurrentTag(tag) return mshpController mashuptrail = Mashuptrail(self.getNewMashuptrailId(), version, id_scope) pipeline = newvt_controller.vistrail.getPipeline(version) id = id_scope.getNewId("mashup") mashup = Mashup(id=id, name="mashup%s" % id, vtid=vt_controller.locator, version=version) mashup.loadAliasesFromPipeline(pipeline, id_scope) currVersion = mashuptrail.addVersion( parent_id=mashuptrail.getLatestVersion(), mashup=mashup, user=core.system.current_user(), date=core.system.current_time(), ) mashuptrail.currentVersion = currVersion MashupsManager.addMashuptrailtoVistrailController(vt_controller, mashuptrail) mshpController = MashupController(vt_controller, newvt_controller, version, mashuptrail) mshpController.setCurrentVersion(mashuptrail.currentVersion) if mshpController.currentVersion == 1L: mshpController.updateCurrentTag("ROOT") else: # print "----> found mashuptrail ", mashuptrail.currentVersion mshpController = MashupController(vt_controller, newvt_controller, version, mashuptrail) mshpController.setCurrentVersion(mashuptrail.currentVersion) mshpController.updatePipelineAliasesFromCurrentMashup() return mshpController