def create(cls, params, experiments, reflections=None):
'''
Compute or load the profile model.
:param params: The input phil parameters
:param experiments: The experiment list
:param reflections: The reflection table
:return: The profile model
'''
from dials.interfaces import ProfileModelIface
Extension = ProfileModelIface.extension(params.profile.algorithm)
Algorithm = Extension().algorithm()
create_profile_model = True
if hasattr(params, 'create_profile_model'):
create_profile_model = params.create_profile_model
if (create_profile_model and reflections is not None
and "shoebox" in reflections):
for expr, indices in reflections.iterate_experiments_and_indices(
experiments):
expr.profile = Algorithm.create(params.profile,
reflections.select(indices),
expr.crystal, expr.beam,
expr.detector, expr.goniometer,
expr.scan)
else:
for expr in experiments:
expr.profile = Algorithm.create(params.profile, None,
expr.crystal, expr.beam,
expr.detector, expr.goniometer,
expr.scan, expr.profile)
return experiments
def create(cls, params, experiments, reflections):
'''
Compute or load the profile model.
:param params: The input phil parameters
:param experiments: The experiment list
:param reflections: The reflection table
:return: The profile model
'''
from dials.interfaces import ProfileModelIface
Extension = ProfileModelIface.extension(params.profile.algorithm)
Algorithm = Extension().algorithm()
for expr, indices in reflections.iterate_experiments_and_indices(
experiments):
expr.profile = Algorithm.create(params.profile,
reflections.select(indices),
expr.crystal, expr.beam,
expr.detector, expr.goniometer,
expr.scan)
return experiments
def create(cls, params, experiments, reflections):
'''
Compute or load the profile model.
:param params: The input phil parameters
:param experiments: The experiment list
:param reflections: The reflection table
:return: The profile model
'''
from dials.interfaces import ProfileModelIface
Extension = ProfileModelIface.extension(params.profile.algorithm)
Algorithm = Extension().algorithm()
for expr, indices in reflections.iterate_experiments_and_indices(experiments):
expr.profile = Algorithm.create(
params.profile,
reflections.select(indices),
expr.crystal,
expr.beam,
expr.detector,
expr.goniometer,
expr.scan)
return experiments
