"computed",
"mean_methy_gaba",
"Mean Methy Signal (GABAergic)",
measurements=methy_gaba_mea,
computeFunc=numpy.mean,
annotation=None)
# load CH Methylation
th3 = TrackHub(
"http://data.nemoarchive.org/nemoHub/Ecker_CH_Methylation_MajorCluster/")
for m in th3.measurements:
m.filehandler = mHandler
mMgr.measurements.append(m)
# Compute normalized CH Methylation track using the norm function
mMgr.add_computed_measurement("computed",
m.mid + "_norm",
m.name + " - Norm",
measurements=[m],
computeFunc=norm,
computeAxis=0,
annotation=m.annotation)
# Load ATAC peaks
fmeasurements = mMgr.import_files(os.getcwd() + "/peaks.json", mHandler)
# setup the app from the measurements manager
# and run the app
app = setup_app(mMgr)
if __name__ == "__main__":
app.run(host="0.0.0.0", port=8000)
from epivizfileserver import setup_app, MeasurementManager
mgr = MeasurementManager()
app = setup_app(mgr)
if __name__ == '__main__':
app.run(host="0.0.0.0", port=8000)