def __find_param__(self, paramSetString):
"""find the parameters of the template
paramSetString is the c++ string which define the parameters set
__find_param__ returns a list of itk classes, itkCType, and/or numbers
which correspond to the parameters described in paramSetString.
The parameters MUST have been registered before calling this method,
or __find_param__ will return a string and not the wanted object, and
will display a warning. Registration order is important.
This method is not static only to be able to display the template name
in the warning
"""
# split the string in a list of parameters
paramStrings = []
inner = 0
part = paramSetString.split(",")
for elt in part:
if inner == 0:
paramStrings.append(elt)
else:
paramStrings[-1] += "," + elt
inner += elt.count("<") - elt.count(">")
# convert all string parameters into classes (if possible)
parameters = []
for param in paramStrings:
# the parameter need to be normalized several time below
# do it once here
param = param.strip()
paramNorm = normalizeName(param)
if itkTemplate.__templates__.has_key(paramNorm):
# the parameter is registered.
# just get the really class form the dictionary
param = itkTemplate.__templates__[paramNorm]
elif itkCType.GetCType(param):
# the parameter is a c type
# just get the itkCtype instance
param = itkCType.GetCType(param)
elif paramNorm.isdigit():
# the parameter is a number
# convert the string to a number !
param = int(param)
else:
# unable to convert the parameter
# use it without changes, but display a warning message, to incite
# developer to fix the problem
print >> sys.stderr, "Warning: Unknown parameter '%s' in template '%s'" % (
param, self.__name__)
parameters.append(param)
return parameters
def ctype(s):
"""Return the c type corresponding to the string passed in parameter
The string can contain some extra spaces.
see also itkCType
"""
from itkTypes import itkCType
ret = itkCType.GetCType(" ".join(s.split()))
if ret is None:
raise KeyError("Unrecognized C type '%s'" % s)
return ret
def loadItkImage(self, filename):
base = itk.ImageIOFactory.CreateImageIO(filename, itk.ImageIOFactory.ReadMode)
base.SetFileName(filename)
base.ReadImageInformation()
componentType = base.GetComponentType()
itkctype = itkCType.GetCType("float")
imageType = itk.Image[itkctype, base.GetNumberOfDimensions()]
reader = itk.ImageFileReader[imageType].New()
reader.SetFileName(filename)
reader.Update()
self.itkImage = reader.GetOutput()
self.itkPixelType = itkctype
self.dimensions = base.GetNumberOfDimensions()