def _run_one(simu_id, result_path, paramtree, measuretree, verbose):
"""
This function need to be outisde Launcher class to allow
multiprocessing module to work
"""
queue = _run_one.q
queue.put({"id": simu_id, "state": "start"})
meta = Metaphase(verbose=False,
paramtree=paramtree,
measuretree=measuretree,
reduce_p=True)
meta.simul()
meta.evaluate()
# Build filename
simu_path = os.path.join(result_path, "simu_%06d.zip" % simu_id)
# Write simulation result
io = SimuIO(meta)
io.save(simufname=simu_path, verbose=False)
queue.put({"id" : simu_id, "state" : "stop" })
del meta
del io
gc.collect()
return True
MEASUREFILE = parameters.MEASUREFILE
# Arguments parser
parser = argparse.ArgumentParser(description="KtSimu Animator")
parser.add_argument("--new", "-n", action="store_true", default=False, help="Run a new simulation")
parser.add_argument(
"--results",
"-r",
type=str,
default="simu.h5",
help="Specified results hdf5 file for new or already runned simulation",
)
args = parser.parse_args()
results_file = args.results
if args.new:
meta = Metaphase(paramfile=PARAMFILE, measurefile=MEASUREFILE, verbose=True)
meta.simul()
io = SimuIO(meta)
io.save(results_file)
else:
meta = SimuIO().read(results_file)
# Run animation
anim = Animator(meta)
anim.play()
