def test_download_configs(self, outdir):
download_obj = DownloadWorkflow(pipeline="nf-core/methylseq",
revision="1.6")
download_obj.outdir = outdir
download_obj.download_configs()
assert os.path.exists(
os.path.join(outdir, "configs", "nfcore_custom.config"))
def test_download_configs(self):
outdir = tempfile.mkdtemp()
download_obj = DownloadWorkflow(pipeline="nf-core/methylseq",
release="1.6")
download_obj.outdir = outdir
download_obj.download_configs()
assert os.path.exists(
os.path.join(outdir, "configs", "nfcore_custom.config"))
def test_download_wf_files(self, outdir):
download_obj = DownloadWorkflow(pipeline="nf-core/methylseq",
revision="1.6")
download_obj.outdir = outdir
download_obj.wf_sha = "b3e5e3b95aaf01d98391a62a10a3990c0a4de395"
download_obj.wf_download_url = (
"https://github.com/nf-core/methylseq/archive/b3e5e3b95aaf01d98391a62a10a3990c0a4de395.zip"
)
download_obj.download_wf_files()
assert os.path.exists(os.path.join(outdir, "workflow", "main.nf"))