sys.stderr.write( "%s\n" % ( msg ) )
help()
sys.exit(1)
if clusteringMethod == "":
msg = "ERROR: missing clustering method (-c)"
sys.stderr.write( "%s\n" % ( msg ) )
help()
sys.exit(1)
if not os.path.exists( inFileName ):
msg = "ERROR: can't find file '%s'" % ( inFileName )
sys.stderr.write( "%s\n" % ( msg ) )
help()
sys.exit(1)
if verbose > 0:
print "START %s" % (sys.argv[0].split("/")[-1])
sys.stdout.flush()
FastaUtils.splitSeqPerCluster( inFileName, clusteringMethod, simplifyHeader,
createDir, "seqCluster", verbose )
if verbose > 0:
print "END %s" % (sys.argv[0].split("/")[-1])
sys.stdout.flush()
return 0
if __name__ == "__main__":
main()
