sys.stderr.write( "%s\n" % ( msg ) ) help() sys.exit(1) if clusteringMethod == "": msg = "ERROR: missing clustering method (-c)" sys.stderr.write( "%s\n" % ( msg ) ) help() sys.exit(1) if not os.path.exists( inFileName ): msg = "ERROR: can't find file '%s'" % ( inFileName ) sys.stderr.write( "%s\n" % ( msg ) ) help() sys.exit(1) if verbose > 0: print "START %s" % (sys.argv[0].split("/")[-1]) sys.stdout.flush() FastaUtils.splitSeqPerCluster( inFileName, clusteringMethod, simplifyHeader, createDir, "seqCluster", verbose ) if verbose > 0: print "END %s" % (sys.argv[0].split("/")[-1]) sys.stdout.flush() return 0 if __name__ == "__main__": main()