def setup(self, unused_timeout = 15):
'''
create a ConceptExtractor and initialize the patient status
the list here is the complete list
'''
'''
self.ce1 = CE.ConceptExtractor("Concept_List_1.csv")
self.ce1.StatusInit()
self.ce2 = CE.ConceptExtractor("Concept_List_2.csv")
self.ce2.StatusInit()
'''
vcl = pd.read_csv(self.exlist)
blackboard = Blackboard()
self.sce = CE.ConceptExtractor(self.slist)
self.sce.StatusInit()
for item in vcl:
self.sce.SpecificInit(item)
self.vce = CE.ConceptExtractor(self.vlist)
#self.vce.StatusInit()
self.ice = CE.ConceptExtractor(self.intlist)
self.ice.StatusInit()
if self.inC:
self.vce.ConceptWrapper(self.inC)
blackboard.Signs = self.sce.Status
blackboard.Vitals = self.vce.Status
blackboard.Inters = self.ice.Status
blackboard.ConcLog = []
return True
def setup(self, unused_timeout=15):
'''
create a ConceptExtractor and initialize the patient status
the list here is the complete list
'''
'''
self.ce1 = CE.ConceptExtractor("Concept_List_1.csv")
self.ce1.StatusInit()
self.ce2 = CE.ConceptExtractor("Concept_List_2.csv")
self.ce2.StatusInit()
'''
vcl = pd.read_csv(self.exlist)
blackboard = Blackboard()
self.sce = CE.CEWithoutMM(self.slist, self.intlist,\
AllinOne_SS = self.aio_ss, AllinOne_Int = self.aio_int,\
neg_res = self.neg_res, WDistance = self.WDistance, aio_only = self.aio_only)
self.sce.StatusInit()
for item in vcl:
self.sce.SpecificInit(item)
self.vce = CE.ConceptExtractor(self.vlist)
#self.vce.StatusInit()
#self.ice = CE.ConceptExtractor(self.intlist)
#self.ice.StatusInit()
if self.inC:
self.vce.ConceptWrapper(self.inC)
blackboard.Signs = self.sce.Status
blackboard.Vitals = self.vce.Status
blackboard.Inters = self.sce.Interventions
blackboard.ConcLog = []
return True
def update(self):
blackboard = Blackboard()
self.sce.ConceptExtract(blackboard.text)
blackboard.concepts = self.sce.concepts
blackboard.confi = self.sce.scores
self.sce.FirstExtract(blackboard.text, blackboard.tick_num)
self.Vital2Symptom()
blackboard.Signs = self.sce.Status
#self.vce.concepts = blackboard.concepts
#self.vce.scores = self.sce.scores
#self.vce.FirstExtract(blackboard.text, blackboard.tick_num)
blackboard.Vitals = self.vce.Status
#self.sce.DisplayStatus()
self.ice.concepts = blackboard.concepts
self.ice.scores = self.sce.scores
self.ice.FirstExtract(blackboard.text, blackboard.tick_num)
blackboard.Inters = self.ice.Status
self.ice.DisplayStatus()
blackboard.ConcLog += self.sce.Log + self.vce.Log
return py_trees.Status.SUCCESS
def setup(self, unused_timeout=15):
'''
create a ConceptExtractor and initialize the patient status
the list here is the complete list
'''
'''
self.ce1 = CE.ConceptExtractor("Concept_List_1.csv")
self.ce1.StatusInit()
self.ce2 = CE.ConceptExtractor("Concept_List_2.csv")
self.ce2.StatusInit()
'''
vcl = pd.read_csv(self.exlist)
blackboard = Blackboard()
# Signs and Symptoms Concept Extractor
self.sce = CE.ConceptExtractor(self.slist)
self.sce.StatusInit()
for item in vcl:
self.sce.SpecificInit(item)
# Vital Signs Concept Extractor
self.vce = CE.ConceptExtractor(self.vlist)
#self.vce.StatusInit()
# Interventions Concept Extractor
self.ice = CE.ConceptExtractor(self.intlist)
self.ice.StatusInit()
self.vce.StatusInit()
if self.inC:
self.vce.ConceptWrapper(self.inC)
# The list of vital signs we support (from RAA data)
pool = ['Pulse', 'Resp', 'BP', 'GCS', 'Glucose', 'SPO2', 'Pain', 'EKG']
for item in pool:
self.vce.SpecificInit(item)
blackboard.Signs = self.sce.Status
blackboard.Vitals = self.vce.Status
blackboard.Inters = self.ice.Status
blackboard.ConcLog = []
return True
