Python get_main_logger Examples

Example #1

File: plotter.py Project: CAMI-challenge/quast_frc

# axis params:
logarithmic_x_scale = False  # for cumulative plots only

####################################################################################
########################  END OF CONFIGURABLE PARAMETERS  ##########################
####################################################################################
import math
import sys

from quast_libs import fastaparser, qconfig, reporting
from quast_libs.log import get_logger, get_main_logger
from quast_libs.qutils import label_from_fpath, parse_str_to_num, run_parallel
from quast_libs.plotter_data import get_color_and_ls, colors

main_logger = get_main_logger()
logger = get_logger(qconfig.LOGGER_DEFAULT_NAME)
meta_logger = get_logger(qconfig.LOGGER_META_NAME)

# checking if matplotlib is installed
can_draw_plots = False
if qconfig.draw_plots:
    try:
        import matplotlib
        matplotlib.use('Agg')  # non-GUI backend
        if matplotlib.__version__.startswith(
                '0') or matplotlib.__version__.startswith('1.0'):
            main_logger.info('')
            main_logger.warning(
                'Can\'t draw plots: matplotlib version is old! Please use matplotlib version 1.1 or higher.'
            )

Example #2

# axis params:
logarithmic_x_scale = False  # for cumulative plots only

####################################################################################
########################  END OF CONFIGURABLE PARAMETERS  ##########################
####################################################################################

import os
import itertools
from quast_libs import fastaparser, qutils
from quast_libs import qconfig

from quast_libs.log import get_logger, get_main_logger

main_logger = get_main_logger()
logger = get_logger(qconfig.LOGGER_DEFAULT_NAME)
meta_logger = get_logger(qconfig.LOGGER_META_NAME)

from . import reporting

# checking if matplotlib is installed
can_draw_plots = True
if qconfig.draw_plots:
    try:
        import matplotlib
        matplotlib.use('Agg')  # non-GUI backend
        if matplotlib.__version__.startswith('0') or matplotlib.__version__.startswith('1.0'):
            main_logger.info('')
            main_logger.warning('Can\'t draw plots: matplotlib version is old! Please use matplotlib version 1.1 or higher.')
            can_draw_plots = False