# axis params:
logarithmic_x_scale = False # for cumulative plots only
####################################################################################
######################## END OF CONFIGURABLE PARAMETERS ##########################
####################################################################################
import math
import sys
from quast_libs import fastaparser, qconfig, reporting
from quast_libs.log import get_logger, get_main_logger
from quast_libs.qutils import label_from_fpath, parse_str_to_num, run_parallel
from quast_libs.plotter_data import get_color_and_ls, colors
main_logger = get_main_logger()
logger = get_logger(qconfig.LOGGER_DEFAULT_NAME)
meta_logger = get_logger(qconfig.LOGGER_META_NAME)
# checking if matplotlib is installed
can_draw_plots = False
if qconfig.draw_plots:
try:
import matplotlib
matplotlib.use('Agg') # non-GUI backend
if matplotlib.__version__.startswith(
'0') or matplotlib.__version__.startswith('1.0'):
main_logger.info('')
main_logger.warning(
'Can\'t draw plots: matplotlib version is old! Please use matplotlib version 1.1 or higher.'
)
# axis params:
logarithmic_x_scale = False # for cumulative plots only
####################################################################################
######################## END OF CONFIGURABLE PARAMETERS ##########################
####################################################################################
import os
import itertools
from quast_libs import fastaparser, qutils
from quast_libs import qconfig
from quast_libs.log import get_logger, get_main_logger
main_logger = get_main_logger()
logger = get_logger(qconfig.LOGGER_DEFAULT_NAME)
meta_logger = get_logger(qconfig.LOGGER_META_NAME)
from . import reporting
# checking if matplotlib is installed
can_draw_plots = True
if qconfig.draw_plots:
try:
import matplotlib
matplotlib.use('Agg') # non-GUI backend
if matplotlib.__version__.startswith('0') or matplotlib.__version__.startswith('1.0'):
main_logger.info('')
main_logger.warning('Can\'t draw plots: matplotlib version is old! Please use matplotlib version 1.1 or higher.')
can_draw_plots = False