def display(self, imagesets, reflections, crystals=None): import wx from dials.util.spotfinder_frame import SpotFrame app = wx.App() self.frame = SpotFrame(None, -1, "X-ray image display", size=(800, 720), pos=(100, 100), params=self.params, imagesets=imagesets, reflections=reflections, crystals=crystals) self.frame.SetSize((1024, 780)) self.frame.Show() from rstbx.slip_viewer.frame import chooser_wrapper for imageset in imagesets: for idx in xrange(len(imageset.indices())): self.frame.add_file_name_or_data(chooser_wrapper( imageset, idx)) self.frame.load_image(chooser_wrapper(imagesets[0], 0)) app.MainLoop()
def display(self, imagesets, reflections, crystals=None): import wx from dials.util.spotfinder_frame import SpotFrame app = wx.App() self.frame = SpotFrame(None, -1, "X-ray image display", size=(800,720), pos=(100,100), params=self.params, imagesets=imagesets, reflections=reflections, crystals=crystals) self.frame.SetSize((1024,780)) self.frame.Show() from rstbx.slip_viewer.frame import chooser_wrapper for imageset in imagesets: for idx in xrange(len(imageset.indices())): self.frame.add_file_name_or_data(chooser_wrapper(imageset, idx)) self.frame.load_image(chooser_wrapper(imagesets[0], 0)) app.MainLoop()
def run(argv=None): if (argv is None): argv = sys.argv # XXX Could/should handle effective metrology the same way, except # it does not have a single scope. work_phil = phil.process_command_line(args=argv[1:], master_string=master_str + phil_str + additional_spotfinder_phil_defs) work_params = work_phil.work.extract() app = wx.App(0) wx.SystemOptions.SetOptionInt("osx.openfiledialog.always-show-types", 1) frame = XrayFrame(None, -1, "X-ray image display", size=(800, 720)) frame.Show() # show settings panel frame.OnShowSettings(None) frame.settings_frame.panel.center_ctrl.SetValue(work_params.beam_center) frame.settings_frame.panel.integ_ctrl.SetValue( work_params.show_integration_results) frame.settings_frame.panel.spots_ctrl.SetValue( work_params.show_spotfinder_results) frame.settings.show_effective_tiling = work_params.show_effective_tiling frame.settings_frame.panel.collect_values() if (work_params.effective_metrology is not None): from xfel.cftbx.detector.metrology import \ master_phil, metrology_as_transformation_matrices stream = open(work_params.effective_metrology) metrology_phil = master_phil.fetch(sources=[phil.parse(stream.read())]) stream.close() frame.metrology_matrices = metrology_as_transformation_matrices( metrology_phil.extract()) # Update initial settings with values from the command line. Needs # to be done before image is loaded (but after the frame is # instantiated). frame.params = work_params frame.init_pyslip() frame.pyslip.tiles.user_requests_antialiasing = work_params.anti_aliasing frame.pyslip.tiles.show_untrusted = frame.params.show_untrusted paths = work_phil.remaining_args if (len(paths) == 1 and os.path.basename(paths[0]) == "DISTL_pickle"): assert os.path.isfile(paths[0]) frame.load_distl_output(paths[0]) elif (len(paths) > 0): frame.CHOOSER_SIZE = 1500 # from dxtbx.imageset import ImageSetFactory # sets = ImageSetFactory.new(paths) from dxtbx.model.experiment_list import ExperimentListFactory from rstbx.slip_viewer.frame import chooser_wrapper experiments = ExperimentListFactory.from_filenames(paths) sets = experiments.imagesets() for imgset in sets: for idx in imgset.indices(): frame.add_file_name_or_data(chooser_wrapper(imgset, idx)) idx = sets[0].indices()[0] frame.load_image(chooser_wrapper(sets[0], idx)) app.MainLoop() return 0
def run(argv=None): if (argv is None): argv = sys.argv # XXX Could/should handle effective metrology the same way, except # it does not have a single scope. work_phil = phil.process_command_line( args=argv[1:], master_string=master_str + phil_str + additional_spotfinder_phil_defs) work_params = work_phil.work.extract() app = wx.App(0) wx.SystemOptions.SetOptionInt("osx.openfiledialog.always-show-types", 1) frame = XrayFrame(None, -1, "X-ray image display", size=(800,720)) frame.Show() # show settings panel frame.OnShowSettings(None) frame.settings_frame.panel.center_ctrl.SetValue( work_params.beam_center) frame.settings_frame.panel.integ_ctrl.SetValue( work_params.show_integration_results) frame.settings_frame.panel.spots_ctrl.SetValue( work_params.show_spotfinder_results) frame.settings.show_effective_tiling = work_params.show_effective_tiling frame.settings_frame.panel.collect_values() if (work_params.effective_metrology is not None): from xfel.cftbx.detector.metrology import \ master_phil, metrology_as_transformation_matrices stream = open(work_params.effective_metrology) metrology_phil = master_phil.fetch(sources=[phil.parse(stream.read())]) stream.close() frame.metrology_matrices = metrology_as_transformation_matrices( metrology_phil.extract()) # Update initial settings with values from the command line. Needs # to be done before image is loaded (but after the frame is # instantiated). frame.params = work_params frame.init_pyslip() frame.pyslip.tiles.user_requests_antialiasing = work_params.anti_aliasing frame.pyslip.tiles.show_untrusted = frame.params.show_untrusted paths = work_phil.remaining_args if (len(paths) == 1 and os.path.basename(paths[0]) == "DISTL_pickle"): assert os.path.isfile(paths[0]) frame.load_distl_output(paths[0]) elif (len(paths) > 0): frame.CHOOSER_SIZE = 1500 from dxtbx.imageset import ImageSetFactory from rstbx.slip_viewer.frame import chooser_wrapper sets = ImageSetFactory.new(paths) for imgset in sets: for idx in imgset.indices(): frame.add_file_name_or_data(chooser_wrapper(imgset, idx)) idx = sets[0].indices()[0] frame.load_image(chooser_wrapper(sets[0],idx)) app.MainLoop() return 0