def execute(self): failed_files = [] for filename in self._filenames: try: ws, run, filename, psi_data = load_utils.load_workspace_from_filename( filename) except Exception as error: failed_files += [(filename, error)] continue if not psi_data: instrument_from_workspace = ws['OutputWorkspace'][ 0].workspace.getInstrument().getName() else: # Load another instrument first instrument_from_workspace = "PSI" self._loaded_data_store.remove_data(run=[run]) self._loaded_data_store.add_data( run=[run], workspace=ws, filename=filename, instrument=instrument_from_workspace) if failed_files: message = load_utils.exception_message_for_failed_files( failed_files) raise ValueError(message)
def setUp(self): self._qapp = mock_widget.mockQapp() # Store an empty widget to parent all the views, and ensure they are deleted correctly self.obj = QtWidgets.QWidget() setup_context_for_tests(self) self.data_context.instrument = 'MUSR' self.gui_context.update({'RebinType': 'None'}) self.model = maxent_model.MaxEntModel() self.view = maxent_view_new.MaxEntView(self.obj) self.presenter = maxent_presenter_new.MaxEntPresenter(self.view, self.context) file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename = load_utils.load_workspace_from_filename(file_path) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.view.warning_popup = mock.MagicMock()
def setUp(self): AnalysisDataService.clear() self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] self.load_result, self.run_number, self.filename = load_workspace_from_filename( self.filepath) self.loaded_data = MuonLoadData() self.data_context = MuonDataContext(self.loaded_data) self.gui_context = MuonGuiContext() self.group_pair_context = MuonGroupPairContext() self.gui_context.update({'RebinType': 'None'}) self.context = MuonContext(muon_data_context=self.data_context, muon_gui_context=self.gui_context, muon_group_context=self.group_pair_context) self.data_context.instrument = 'EMU' self.loaded_data.add_data(workspace=self.load_result, run=[self.run_number], filename=self.filename, instrument='EMU') self.data_context.current_runs = [[self.run_number]] self.data_context.update_current_data() self.group_pair_context.reset_group_and_pairs_to_default( self.load_result['OutputWorkspace'][0]._workspace, 'EMU', '')
def test_get_pair_phasequad_name(self): AnalysisDataService.clear() ConfigService['MantidOptions.InvisibleWorkspaces'] = 'True' filepath = FileFinder.findRuns('EMU00019489.nxs')[0] load_result, run_number, filename, psi_data = load_workspace_from_filename( filepath) context = setup_context() context.gui_context.update({'RebinType': 'None'}) context.data_context.instrument = 'EMU' context.data_context._loaded_data.add_data(workspace=load_result, run=[run_number], filename=filename, instrument='EMU') context.data_context.current_runs = [[run_number]] context.data_context.update_current_data() self.assertEqual( "EMU19489; PhaseQuad; test_Re; MA", get_pair_phasequad_name(context, "test_Re", "19489", False)) self.assertEqual( "EMU19489; PhaseQuad; test_Re; Rebin; MA", get_pair_phasequad_name(context, "test_Re", "19489", True))
def setUp(self): AnalysisDataService.clear() ConfigService['MantidOptions.InvisibleWorkspaces'] = 'True' self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] self.load_result, self.run_number, self.filename, psi_data = load_workspace_from_filename( self.filepath) self.assert_(not psi_data) self.context = setup_context(True) self.context.gui_context.update({'RebinType': 'None'}) self.loaded_data = self.context.data_context._loaded_data self.data_context = self.context.data_context self.gui_context = self.context.gui_context self.group_pair_context = self.context.group_pair_context self.data_context.instrument = 'EMU' self.loaded_data.add_data(workspace=self.load_result, run=[self.run_number], filename=self.filename, instrument='EMU') self.data_context.current_runs = [[self.run_number]] self.data_context.update_current_data() self.group_pair_context.reset_group_and_pairs_to_default( self.load_result['OutputWorkspace'][0].workspace, 'EMU', '', 1)
def setUp(self): self.context = setup_context(True) self.context.data_context.instrument = 'MUSR' self.context.gui_context.update({'RebinType': 'None'}) self.view = fft_view_new.FFTView() self.model1 = fft_model.FFTModel() self.model = fft_model.FFTWrapper self.presenter = fft_presenter_new.FFTPresenter( self.view, self.model, self.context) file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename, _ = load_utils.load_workspace_from_filename(file_path) self.context.data_context._loaded_data.remove_data(run=run) self.context.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.context.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair(EXAMPLE_PAIR, 'top', 'bottom', alpha=0.75) self.context.group_pair_context.add_pair(pair=test_pair) self.context.show_all_groups() self.context.show_all_pairs() self.context.group_pair_context._selected_groups = GROUP_LIST self.context.group_pair_context._selected_pairs = [EXAMPLE_PAIR] self.view.warning_popup = mock.MagicMock()
def test_runinfo_correct(self): file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename = load_utils.load_workspace_from_filename(file_path) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.presenter.update_view_from_model() expected_string_list = [ 'Instrument:MUSR', 'Run:22725', 'Title:FeTeSeT=1F=100', 'Comment:FCfirstsample', 'Start:2009-03-24T04:18:58', 'End:2009-03-24T04:56:26', 'Counts(MEv):20.076704', 'GoodFrames:88540', 'CountsperGoodFrame:226.753', 'CountsperGoodFrameperdet:3.543', 'AverageTemperature(K):2.53386', 'SampleTemperature(K):1.0', 'SampleMagneticField(G):100.0' ] self.assertEqual( str(self.view.run_info_box.toPlainText()).replace(' ', '').splitlines(), expected_string_list)
def setUp(self): self.context = setup_context(True) self.context.data_context.instrument = 'MUSR' self.context.gui_context.update({'RebinType': 'None'}) self.model = maxent_model.MaxEntModel() self.view = maxent_view_new.MaxEntView() self.presenter = maxent_presenter_new.MaxEntPresenter( self.view, self.context) file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename, _ = load_utils.load_workspace_from_filename( file_path) self.context.data_context._loaded_data.remove_data(run=run) self.context.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.context.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.context.group_pair_context.add_pair(pair=test_pair) self.view.warning_popup = mock.MagicMock()
def setUp(self): self._qapp = mock_widget.mockQapp() self.obj = QtGui.QWidget() ConfigService['default.instrument'] = 'MUSR' setup_context_for_tests(self) self.gui_context['RebinType'] = 'None' self.view = HomeGroupingWidgetView(self.obj) self.model = HomeGroupingWidgetModel(self.context) self.presenter = HomeGroupingWidgetPresenter(self.view, self.model) self.view.warning_popup = mock.MagicMock() self.view.instrument_changed_warning = mock.MagicMock(return_value=1) file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename = load_utils.load_workspace_from_filename(file_path) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.presenter.update_group_pair_list()
def test_load_workspace_from_filename_for_existing_file(self): filename = 'MUSR00022725.nsx' load_result, run, filename, _ = utils.load_workspace_from_filename(filename) self.assertEqual(load_result['DeadTimeTable'], None) self.assertEqual(load_result['FirstGoodData'], 0.11) self.assertEqual(load_result['MainFieldDirection'], 'Transverse') self.assertAlmostEqual(load_result['TimeZero'], 0.55000, 5) self.assertEqual(run, 22725)
def test_load_workspace_from_filename_for_existing_file(self): filename = 'MUSR00022725.nsx' load_result, run, filename = utils.load_workspace_from_filename(filename) self.assertEqual(load_result['DeadTimeTable'], None) self.assertEqual(load_result['FirstGoodData'], 0.11) self.assertEqual(load_result['MainFieldDirection'], 'Transverse') self.assertAlmostEqual(load_result['TimeZero'], 0.55000, 5) self.assertEqual(run, 22725)
def test_load_workspace_from_filename_for_existing_file(self): ConfigService.Instance().setString("default.facility", "ISIS") filename = 'MUSR00022725.nsx' load_result, run, filename, _ = utils.load_workspace_from_filename( filename) self.assertEqual(load_result['DeadTimeTable'], None) self.assertEqual(load_result['FirstGoodData'], 0.106) self.assertEqual(load_result['MainFieldDirection'], 'Transverse') self.assertAlmostEqual(load_result['TimeZero'], 0.55000, 5) self.assertEqual(run, 22725) ConfigService.Instance().setString("default.facility", " ")
def execute(self): failed_files = [] for filename in self._filenames: try: ws, run, filename = load_utils.load_workspace_from_filename(filename) except Exception as error: failed_files += [(filename, error)] continue self._loaded_data_store.remove_data(run=[run]) self._loaded_data_store.add_data(run=[run], workspace=ws, filename=filename, instrument=self._data_context.instrument) if failed_files: message = load_utils.exception_message_for_failed_files(failed_files) raise ValueError(message)
def execute(self): failed_files = [] for filename in self._filenames: try: ws, run, filename = load_utils.load_workspace_from_filename(filename) except Exception: failed_files += [filename] continue self._loaded_data_store.remove_data(run=run) self._loaded_data_store.add_data(run=run, workspace=ws, filename=filename) if failed_files: message = load_utils.exception_message_for_failed_files(failed_files) raise ValueError(message)
def setUp(self): self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] self.load_result, self.run_number, self.filename, _ = load_workspace_from_filename( self.filepath) self.loaded_data = MuonLoadData() self.context = MuonDataContext(load_data=self.loaded_data) self.context.instrument = 'EMU' self.loaded_data.add_data(workspace=self.load_result, run=[self.run_number], filename=self.filename, instrument='EMU') self.context.current_runs = [[self.run_number]] self.context.update_current_data()
def setUp(self): self.loaded_data = MuonLoadData() self.context = MuonDataContext(self.loaded_data) self.context.instrument = 'EMU' filepath = FileFinder.findRuns('EMU00019489.nxs')[0] load_result, run, filename = load_workspace_from_filename(filepath) self.loaded_data.add_data(workspace=load_result, run=[run], filename=filename, instrument='EMU') self.context.current_runs = [[run]] self.context.update_current_data()
def execute(self): failed_files = [] for filename in self._filenames: try: ws, run, filename = load_utils.load_workspace_from_filename( filename) except Exception: failed_files += [filename] continue self._loaded_data_store.remove_data(run=run) self._loaded_data_store.add_data(run=run, workspace=ws, filename=filename) if failed_files: message = load_utils.exception_message_for_failed_files( failed_files) raise ValueError(message)
def perform_psi_file_finder(self): file_path = FileFinder.findRuns('deltat_tdc_dolly_1529.bin')[0] ws, run, filename, psi_data = load_utils.load_workspace_from_filename( file_path) self.assert_(psi_data) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='PSI') self.data_context.current_runs = [[1529]] self.context.data_context._instrument = "PSI" self.context.update_current_data() test_pair = MuonPair('test_pair1', 'Forw', 'Back', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.presenter.update_group_pair_list()
def perform_musr_file_finder(self): ConfigService['default.instrument'] = 'MUSR' file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename, psi_data = load_utils.load_workspace_from_filename( file_path) self.assert_(not psi_data) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.data_context.current_runs = [[22725]] self.context.data_context._instrument = "MUSR" self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.presenter.update_group_pair_list()
def setUp(self): setup_context_for_tests(self) self.frequency_context = FrequencyContext(self.context) self.gui_variable_observer = Observer() self.gui_variable_observer.update = mock.MagicMock() self.gui_context.gui_variables_notifier.add_subscriber(self.gui_variable_observer) self.data_context.instrument = 'CHRONUS' self.gui_variable_observer = Observer() self.gui_variable_observer.update = mock.MagicMock() self.gui_context.gui_variables_notifier.add_subscriber(self.gui_variable_observer) filepath = FileFinder.findRuns('CHRONUS00003422.nxs')[0] load_result, run, filename = load_workspace_from_filename(filepath) self.loaded_data.add_data(workspace=load_result, run=[run], filename=filename, instrument='CHRONUS') self.data_context.current_runs = [[run]] self.context.update_current_data()
def test_runinfo_correct(self): file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename = load_utils.load_workspace_from_filename(file_path) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.presenter.update_view_from_model() expected_string_list = ['Instrument:MUSR', 'Run:22725', 'Title:FeTeSeT=1F=100', 'Comment:FCfirstsample', 'Start:2009-03-24T04:18:58', 'End:2009-03-24T04:56:26', 'Counts(MEv):20.076704', 'GoodFrames:88540', 'CountsperGoodFrame:226.753', 'CountsperGoodFrameperdet:3.543', 'AverageTemperature(K):2.53386', 'SampleTemperature(K):1.0', 'SampleMagneticField(G):100.0'] self.assertEqual(str(self.view.run_info_box.toPlainText()).replace(' ', '').splitlines(), expected_string_list)
def execute(self): failed_files = [] for filename in self._filenames: try: ws, run, filename, _ = load_utils.load_workspace_from_filename( filename) except ValueError as error: failed_files += [(filename, error)] continue self._loaded_data_store.remove_data(run=[run]) self._loaded_data_store.add_data( run=[run], workspace=ws, filename=filename, instrument=self._data_context.instrument) if failed_files: message = "The requested run could not be found. This could be due to: \n - The run does not yet exist." \ "\n - The file was not found locally (please check the user directories)." raise ValueError(message)
def setUp(self): AnalysisDataService.clear() self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] self.load_result, self.run_number, self.filename = load_workspace_from_filename(self.filepath) self.loaded_data = MuonLoadData() self.data_context = MuonDataContext(self.loaded_data) self.gui_context = MuonGuiContext() self.group_pair_context = MuonGroupPairContext() self.gui_context.update({'RebinType': 'None'}) self.context = MuonContext(muon_data_context=self.data_context, muon_gui_context=self.gui_context, muon_group_context=self.group_pair_context) self.data_context.instrument = 'EMU' self.loaded_data.add_data(workspace=self.load_result, run=[self.run_number], filename=self.filename, instrument='EMU') self.data_context.current_runs = [[self.run_number]] self.data_context.update_current_data() self.group_pair_context.reset_group_and_pairs_to_default(self.load_result['OutputWorkspace'][0]._workspace, 'EMU', '')
def setUp(self): self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] self.load_result, self.run_number, self.filename, _ = load_workspace_from_filename( self.filepath) self.context = setup_context() self.context.gui_context.update({'RebinType': 'None'}) self.model = CorrectionsModel(self.context) self.runs = [[84447], [84448], [84449]] self.coadd_runs = [[84447, 84448, 84449]] self.context.data_context.instrument = 'EMU' self.context.data_context._loaded_data.add_data( workspace=self.load_result, run=[self.run_number], filename=self.filename, instrument='EMU') self.context.data_context.current_runs = [[self.run_number]] self.context.data_context.update_current_data() self.context.group_pair_context.reset_group_and_pairs_to_default( self.load_result['OutputWorkspace'][0].workspace, 'EMU', '', 1)
def setUp(self): setup_context_for_tests(self) self.gui_variable_observer = Observer() self.gui_variable_observer.update = mock.MagicMock() self.gui_context.gui_variables_notifier.add_subscriber( self.gui_variable_observer) self.data_context.instrument = 'CHRONUS' self.gui_variable_observer = Observer() self.gui_variable_observer.update = mock.MagicMock() self.gui_context.gui_variables_notifier.add_subscriber( self.gui_variable_observer) filepath = FileFinder.findRuns('CHRONUS00003422.nxs')[0] load_result, run, filename, _ = load_workspace_from_filename(filepath) self.loaded_data.add_data(workspace=load_result, run=[run], filename=filename, instrument='CHRONUS') self.data_context.current_runs = [[run]] self.context.update_current_data()
def setUp(self): self._qapp = mock_widget.mockQapp() self.obj = QtGui.QWidget() ConfigService['default.instrument'] = 'MUSR' setup_context_for_tests(self) self.gui_context['RebinType'] = 'None' self.view = HomeGroupingWidgetView(self.obj) self.model = HomeGroupingWidgetModel(self.context) self.presenter = HomeGroupingWidgetPresenter(self.view, self.model) self.view.warning_popup = mock.MagicMock() self.view.instrument_changed_warning = mock.MagicMock(return_value=1) file_path = FileFinder.findRuns('MUSR00022725.nxs')[0] ws, run, filename = load_utils.load_workspace_from_filename(file_path) self.data_context._loaded_data.remove_data(run=run) self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR') self.data_context.current_runs = [[22725]] self.context.update_current_data() test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75) self.group_context.add_pair(pair=test_pair) self.presenter.update_group_pair_list()
def setUpClass(cls): super(MuonDataContextTest, cls).setUpClass() cls.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] cls.load_result, cls.run_number, cls.filename, _ = load_workspace_from_filename( cls.filepath)
def setUpClass(cls): cls.filepath = FileFinder.findRuns('EMU00019489.nxs')[0] cls.load_result, cls.run_number, cls.filename = load_workspace_from_filename(cls.filepath)