def execute(self):
failed_files = []
for filename in self._filenames:
try:
ws, run, filename, psi_data = load_utils.load_workspace_from_filename(
filename)
except Exception as error:
failed_files += [(filename, error)]
continue
if not psi_data:
instrument_from_workspace = ws['OutputWorkspace'][
0].workspace.getInstrument().getName()
else:
# Load another instrument first
instrument_from_workspace = "PSI"
self._loaded_data_store.remove_data(run=[run])
self._loaded_data_store.add_data(
run=[run],
workspace=ws,
filename=filename,
instrument=instrument_from_workspace)
if failed_files:
message = load_utils.exception_message_for_failed_files(
failed_files)
raise ValueError(message)
def setUp(self):
self._qapp = mock_widget.mockQapp()
# Store an empty widget to parent all the views, and ensure they are deleted correctly
self.obj = QtWidgets.QWidget()
setup_context_for_tests(self)
self.data_context.instrument = 'MUSR'
self.gui_context.update({'RebinType': 'None'})
self.model = maxent_model.MaxEntModel()
self.view = maxent_view_new.MaxEntView(self.obj)
self.presenter = maxent_presenter_new.MaxEntPresenter(self.view, self.context)
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename = load_utils.load_workspace_from_filename(file_path)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR')
self.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.view.warning_popup = mock.MagicMock()
def setUp(self):
AnalysisDataService.clear()
self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
self.load_result, self.run_number, self.filename = load_workspace_from_filename(
self.filepath)
self.loaded_data = MuonLoadData()
self.data_context = MuonDataContext(self.loaded_data)
self.gui_context = MuonGuiContext()
self.group_pair_context = MuonGroupPairContext()
self.gui_context.update({'RebinType': 'None'})
self.context = MuonContext(muon_data_context=self.data_context,
muon_gui_context=self.gui_context,
muon_group_context=self.group_pair_context)
self.data_context.instrument = 'EMU'
self.loaded_data.add_data(workspace=self.load_result,
run=[self.run_number],
filename=self.filename,
instrument='EMU')
self.data_context.current_runs = [[self.run_number]]
self.data_context.update_current_data()
self.group_pair_context.reset_group_and_pairs_to_default(
self.load_result['OutputWorkspace'][0]._workspace, 'EMU', '')
def test_get_pair_phasequad_name(self):
AnalysisDataService.clear()
ConfigService['MantidOptions.InvisibleWorkspaces'] = 'True'
filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
load_result, run_number, filename, psi_data = load_workspace_from_filename(
filepath)
context = setup_context()
context.gui_context.update({'RebinType': 'None'})
context.data_context.instrument = 'EMU'
context.data_context._loaded_data.add_data(workspace=load_result,
run=[run_number],
filename=filename,
instrument='EMU')
context.data_context.current_runs = [[run_number]]
context.data_context.update_current_data()
self.assertEqual(
"EMU19489; PhaseQuad; test_Re; MA",
get_pair_phasequad_name(context, "test_Re", "19489", False))
self.assertEqual(
"EMU19489; PhaseQuad; test_Re; Rebin; MA",
get_pair_phasequad_name(context, "test_Re", "19489", True))
def setUp(self):
AnalysisDataService.clear()
ConfigService['MantidOptions.InvisibleWorkspaces'] = 'True'
self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
self.load_result, self.run_number, self.filename, psi_data = load_workspace_from_filename(
self.filepath)
self.assert_(not psi_data)
self.context = setup_context(True)
self.context.gui_context.update({'RebinType': 'None'})
self.loaded_data = self.context.data_context._loaded_data
self.data_context = self.context.data_context
self.gui_context = self.context.gui_context
self.group_pair_context = self.context.group_pair_context
self.data_context.instrument = 'EMU'
self.loaded_data.add_data(workspace=self.load_result,
run=[self.run_number],
filename=self.filename,
instrument='EMU')
self.data_context.current_runs = [[self.run_number]]
self.data_context.update_current_data()
self.group_pair_context.reset_group_and_pairs_to_default(
self.load_result['OutputWorkspace'][0].workspace, 'EMU', '', 1)
def setUp(self):
self.context = setup_context(True)
self.context.data_context.instrument = 'MUSR'
self.context.gui_context.update({'RebinType': 'None'})
self.view = fft_view_new.FFTView()
self.model1 = fft_model.FFTModel()
self.model = fft_model.FFTWrapper
self.presenter = fft_presenter_new.FFTPresenter(
self.view, self.model, self.context)
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename, _ = load_utils.load_workspace_from_filename(file_path)
self.context.data_context._loaded_data.remove_data(run=run)
self.context.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR')
self.context.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair(EXAMPLE_PAIR, 'top', 'bottom', alpha=0.75)
self.context.group_pair_context.add_pair(pair=test_pair)
self.context.show_all_groups()
self.context.show_all_pairs()
self.context.group_pair_context._selected_groups = GROUP_LIST
self.context.group_pair_context._selected_pairs = [EXAMPLE_PAIR]
self.view.warning_popup = mock.MagicMock()
def test_runinfo_correct(self):
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename = load_utils.load_workspace_from_filename(file_path)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run],
workspace=ws,
filename=filename,
instrument='MUSR')
self.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.presenter.update_view_from_model()
expected_string_list = [
'Instrument:MUSR', 'Run:22725', 'Title:FeTeSeT=1F=100',
'Comment:FCfirstsample', 'Start:2009-03-24T04:18:58',
'End:2009-03-24T04:56:26', 'Counts(MEv):20.076704',
'GoodFrames:88540', 'CountsperGoodFrame:226.753',
'CountsperGoodFrameperdet:3.543', 'AverageTemperature(K):2.53386',
'SampleTemperature(K):1.0', 'SampleMagneticField(G):100.0'
]
self.assertEqual(
str(self.view.run_info_box.toPlainText()).replace(' ',
'').splitlines(),
expected_string_list)
def setUp(self):
self.context = setup_context(True)
self.context.data_context.instrument = 'MUSR'
self.context.gui_context.update({'RebinType': 'None'})
self.model = maxent_model.MaxEntModel()
self.view = maxent_view_new.MaxEntView()
self.presenter = maxent_presenter_new.MaxEntPresenter(
self.view, self.context)
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename, _ = load_utils.load_workspace_from_filename(
file_path)
self.context.data_context._loaded_data.remove_data(run=run)
self.context.data_context._loaded_data.add_data(run=[run],
workspace=ws,
filename=filename,
instrument='MUSR')
self.context.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.context.group_pair_context.add_pair(pair=test_pair)
self.view.warning_popup = mock.MagicMock()
def setUp(self):
self._qapp = mock_widget.mockQapp()
self.obj = QtGui.QWidget()
ConfigService['default.instrument'] = 'MUSR'
setup_context_for_tests(self)
self.gui_context['RebinType'] = 'None'
self.view = HomeGroupingWidgetView(self.obj)
self.model = HomeGroupingWidgetModel(self.context)
self.presenter = HomeGroupingWidgetPresenter(self.view, self.model)
self.view.warning_popup = mock.MagicMock()
self.view.instrument_changed_warning = mock.MagicMock(return_value=1)
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename = load_utils.load_workspace_from_filename(file_path)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run],
workspace=ws,
filename=filename,
instrument='MUSR')
self.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.presenter.update_group_pair_list()
def test_load_workspace_from_filename_for_existing_file(self):
filename = 'MUSR00022725.nsx'
load_result, run, filename, _ = utils.load_workspace_from_filename(filename)
self.assertEqual(load_result['DeadTimeTable'], None)
self.assertEqual(load_result['FirstGoodData'], 0.11)
self.assertEqual(load_result['MainFieldDirection'], 'Transverse')
self.assertAlmostEqual(load_result['TimeZero'], 0.55000, 5)
self.assertEqual(run, 22725)
def test_load_workspace_from_filename_for_existing_file(self):
filename = 'MUSR00022725.nsx'
load_result, run, filename = utils.load_workspace_from_filename(filename)
self.assertEqual(load_result['DeadTimeTable'], None)
self.assertEqual(load_result['FirstGoodData'], 0.11)
self.assertEqual(load_result['MainFieldDirection'], 'Transverse')
self.assertAlmostEqual(load_result['TimeZero'], 0.55000, 5)
self.assertEqual(run, 22725)
def test_load_workspace_from_filename_for_existing_file(self):
ConfigService.Instance().setString("default.facility", "ISIS")
filename = 'MUSR00022725.nsx'
load_result, run, filename, _ = utils.load_workspace_from_filename(
filename)
self.assertEqual(load_result['DeadTimeTable'], None)
self.assertEqual(load_result['FirstGoodData'], 0.106)
self.assertEqual(load_result['MainFieldDirection'], 'Transverse')
self.assertAlmostEqual(load_result['TimeZero'], 0.55000, 5)
self.assertEqual(run, 22725)
ConfigService.Instance().setString("default.facility", " ")
def execute(self):
failed_files = []
for filename in self._filenames:
try:
ws, run, filename = load_utils.load_workspace_from_filename(filename)
except Exception as error:
failed_files += [(filename, error)]
continue
self._loaded_data_store.remove_data(run=[run])
self._loaded_data_store.add_data(run=[run], workspace=ws, filename=filename, instrument=self._data_context.instrument)
if failed_files:
message = load_utils.exception_message_for_failed_files(failed_files)
raise ValueError(message)
def execute(self):
failed_files = []
for filename in self._filenames:
try:
ws, run, filename = load_utils.load_workspace_from_filename(filename)
except Exception:
failed_files += [filename]
continue
self._loaded_data_store.remove_data(run=run)
self._loaded_data_store.add_data(run=run, workspace=ws, filename=filename)
if failed_files:
message = load_utils.exception_message_for_failed_files(failed_files)
raise ValueError(message)
def setUp(self):
self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
self.load_result, self.run_number, self.filename, _ = load_workspace_from_filename(
self.filepath)
self.loaded_data = MuonLoadData()
self.context = MuonDataContext(load_data=self.loaded_data)
self.context.instrument = 'EMU'
self.loaded_data.add_data(workspace=self.load_result,
run=[self.run_number],
filename=self.filename,
instrument='EMU')
self.context.current_runs = [[self.run_number]]
self.context.update_current_data()
def setUp(self):
self.loaded_data = MuonLoadData()
self.context = MuonDataContext(self.loaded_data)
self.context.instrument = 'EMU'
filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
load_result, run, filename = load_workspace_from_filename(filepath)
self.loaded_data.add_data(workspace=load_result,
run=[run],
filename=filename,
instrument='EMU')
self.context.current_runs = [[run]]
self.context.update_current_data()
def execute(self):
failed_files = []
for filename in self._filenames:
try:
ws, run, filename = load_utils.load_workspace_from_filename(
filename)
except Exception:
failed_files += [filename]
continue
self._loaded_data_store.remove_data(run=run)
self._loaded_data_store.add_data(run=run,
workspace=ws,
filename=filename)
if failed_files:
message = load_utils.exception_message_for_failed_files(
failed_files)
raise ValueError(message)
def perform_psi_file_finder(self):
file_path = FileFinder.findRuns('deltat_tdc_dolly_1529.bin')[0]
ws, run, filename, psi_data = load_utils.load_workspace_from_filename(
file_path)
self.assert_(psi_data)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run],
workspace=ws,
filename=filename,
instrument='PSI')
self.data_context.current_runs = [[1529]]
self.context.data_context._instrument = "PSI"
self.context.update_current_data()
test_pair = MuonPair('test_pair1', 'Forw', 'Back', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.presenter.update_group_pair_list()
def perform_musr_file_finder(self):
ConfigService['default.instrument'] = 'MUSR'
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename, psi_data = load_utils.load_workspace_from_filename(
file_path)
self.assert_(not psi_data)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run],
workspace=ws,
filename=filename,
instrument='MUSR')
self.data_context.current_runs = [[22725]]
self.context.data_context._instrument = "MUSR"
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.presenter.update_group_pair_list()
def setUp(self):
setup_context_for_tests(self)
self.frequency_context = FrequencyContext(self.context)
self.gui_variable_observer = Observer()
self.gui_variable_observer.update = mock.MagicMock()
self.gui_context.gui_variables_notifier.add_subscriber(self.gui_variable_observer)
self.data_context.instrument = 'CHRONUS'
self.gui_variable_observer = Observer()
self.gui_variable_observer.update = mock.MagicMock()
self.gui_context.gui_variables_notifier.add_subscriber(self.gui_variable_observer)
filepath = FileFinder.findRuns('CHRONUS00003422.nxs')[0]
load_result, run, filename = load_workspace_from_filename(filepath)
self.loaded_data.add_data(workspace=load_result, run=[run], filename=filename, instrument='CHRONUS')
self.data_context.current_runs = [[run]]
self.context.update_current_data()
def test_runinfo_correct(self):
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename = load_utils.load_workspace_from_filename(file_path)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR')
self.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.presenter.update_view_from_model()
expected_string_list = ['Instrument:MUSR', 'Run:22725', 'Title:FeTeSeT=1F=100', 'Comment:FCfirstsample',
'Start:2009-03-24T04:18:58', 'End:2009-03-24T04:56:26', 'Counts(MEv):20.076704',
'GoodFrames:88540', 'CountsperGoodFrame:226.753',
'CountsperGoodFrameperdet:3.543', 'AverageTemperature(K):2.53386',
'SampleTemperature(K):1.0', 'SampleMagneticField(G):100.0']
self.assertEqual(str(self.view.run_info_box.toPlainText()).replace(' ', '').splitlines(), expected_string_list)
def execute(self):
failed_files = []
for filename in self._filenames:
try:
ws, run, filename, _ = load_utils.load_workspace_from_filename(
filename)
except ValueError as error:
failed_files += [(filename, error)]
continue
self._loaded_data_store.remove_data(run=[run])
self._loaded_data_store.add_data(
run=[run],
workspace=ws,
filename=filename,
instrument=self._data_context.instrument)
if failed_files:
message = "The requested run could not be found. This could be due to: \n - The run does not yet exist." \
"\n - The file was not found locally (please check the user directories)."
raise ValueError(message)
def setUp(self):
AnalysisDataService.clear()
self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
self.load_result, self.run_number, self.filename = load_workspace_from_filename(self.filepath)
self.loaded_data = MuonLoadData()
self.data_context = MuonDataContext(self.loaded_data)
self.gui_context = MuonGuiContext()
self.group_pair_context = MuonGroupPairContext()
self.gui_context.update({'RebinType': 'None'})
self.context = MuonContext(muon_data_context=self.data_context, muon_gui_context=self.gui_context, muon_group_context=self.group_pair_context)
self.data_context.instrument = 'EMU'
self.loaded_data.add_data(workspace=self.load_result, run=[self.run_number], filename=self.filename,
instrument='EMU')
self.data_context.current_runs = [[self.run_number]]
self.data_context.update_current_data()
self.group_pair_context.reset_group_and_pairs_to_default(self.load_result['OutputWorkspace'][0]._workspace,
'EMU', '')
def setUp(self):
self.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
self.load_result, self.run_number, self.filename, _ = load_workspace_from_filename(
self.filepath)
self.context = setup_context()
self.context.gui_context.update({'RebinType': 'None'})
self.model = CorrectionsModel(self.context)
self.runs = [[84447], [84448], [84449]]
self.coadd_runs = [[84447, 84448, 84449]]
self.context.data_context.instrument = 'EMU'
self.context.data_context._loaded_data.add_data(
workspace=self.load_result,
run=[self.run_number],
filename=self.filename,
instrument='EMU')
self.context.data_context.current_runs = [[self.run_number]]
self.context.data_context.update_current_data()
self.context.group_pair_context.reset_group_and_pairs_to_default(
self.load_result['OutputWorkspace'][0].workspace, 'EMU', '', 1)
def setUp(self):
setup_context_for_tests(self)
self.gui_variable_observer = Observer()
self.gui_variable_observer.update = mock.MagicMock()
self.gui_context.gui_variables_notifier.add_subscriber(
self.gui_variable_observer)
self.data_context.instrument = 'CHRONUS'
self.gui_variable_observer = Observer()
self.gui_variable_observer.update = mock.MagicMock()
self.gui_context.gui_variables_notifier.add_subscriber(
self.gui_variable_observer)
filepath = FileFinder.findRuns('CHRONUS00003422.nxs')[0]
load_result, run, filename, _ = load_workspace_from_filename(filepath)
self.loaded_data.add_data(workspace=load_result,
run=[run],
filename=filename,
instrument='CHRONUS')
self.data_context.current_runs = [[run]]
self.context.update_current_data()
def setUp(self):
self._qapp = mock_widget.mockQapp()
self.obj = QtGui.QWidget()
ConfigService['default.instrument'] = 'MUSR'
setup_context_for_tests(self)
self.gui_context['RebinType'] = 'None'
self.view = HomeGroupingWidgetView(self.obj)
self.model = HomeGroupingWidgetModel(self.context)
self.presenter = HomeGroupingWidgetPresenter(self.view, self.model)
self.view.warning_popup = mock.MagicMock()
self.view.instrument_changed_warning = mock.MagicMock(return_value=1)
file_path = FileFinder.findRuns('MUSR00022725.nxs')[0]
ws, run, filename = load_utils.load_workspace_from_filename(file_path)
self.data_context._loaded_data.remove_data(run=run)
self.data_context._loaded_data.add_data(run=[run], workspace=ws, filename=filename, instrument='MUSR')
self.data_context.current_runs = [[22725]]
self.context.update_current_data()
test_pair = MuonPair('test_pair', 'top', 'bottom', alpha=0.75)
self.group_context.add_pair(pair=test_pair)
self.presenter.update_group_pair_list()
def setUpClass(cls):
super(MuonDataContextTest, cls).setUpClass()
cls.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
cls.load_result, cls.run_number, cls.filename, _ = load_workspace_from_filename(
cls.filepath)
def setUpClass(cls):
cls.filepath = FileFinder.findRuns('EMU00019489.nxs')[0]
cls.load_result, cls.run_number, cls.filename = load_workspace_from_filename(cls.filepath)
