def test_can_redefine_accepted(self):
# Altamiranoa Rose used to refer to Villadia Rose for its accepted
# name, it is now updated to Sedum L.
## T_0
claceae = Family(family=u"Crassulaceae") # J. St.-Hil.
villa = Genus(family=claceae, genus=u"Villadia", author=u"Rose")
alta = Genus(family=claceae, genus=u"Altamiranoa", author=u"Rose")
alta.accepted = villa
self.session.add_all([claceae, alta, villa])
self.session.commit()
sedum = Genus(family=claceae, genus=u"Sedum", author=u"L.")
alta.accepted = sedum
self.session.commit()
def test_define_accepted(self):
# notice that same test should be also in Species and Family
bu = self.session.query(Genus).filter(Genus.genus == u"Bulbophyllum").one()
f = self.session.query(Family).filter(Family.family == u"Orchidaceae").one()
he = Genus(family=f, genus=u"Henosis") # one more synonym
self.session.add(he)
self.session.commit()
self.assertEquals(len(bu.synonyms), 1)
self.assertFalse(he in bu.synonyms)
he.accepted = bu
self.assertEquals(len(bu.synonyms), 2)
self.assertTrue(he in bu.synonyms)
def test_search_by_query_synonyms(self):
"""SynonymSearch strategy gives all synonyms of given taxon."""
Family = self.Family
Genus = self.Genus
family2 = Family(family=u'family2')
g2 = Genus(family=family2, genus=u'genus2')
f3 = Family(family=u'fam3', qualifier=u's. lat.')
g3 = Genus(family=f3, genus=u'Ixora')
g4 = Genus(family=f3, genus=u'Schetti')
self.session.add_all([family2, g2, f3, g3, g4])
g4.accepted = g3
self.session.commit()
mapper_search = search.get_strategy('SynonymSearch')
s = 'Schetti'
results = mapper_search.search(s, self.session)
self.assertEqual(results, [g3])
def test_search_by_query_synonyms(self):
"""SynonymSearch strategy gives all synonyms of given taxon."""
Family = self.Family
Genus = self.Genus
family2 = Family(family=u'family2')
g2 = Genus(family=family2, genus=u'genus2')
f3 = Family(family=u'fam3', qualifier=u's. lat.')
g3 = Genus(family=f3, genus=u'Ixora')
g4 = Genus(family=f3, genus=u'Schetti')
self.session.add_all([family2, g2, f3, g3, g4])
g4.accepted = g3
self.session.commit()
mapper_search = search.get_strategy('SynonymSearch')
s = 'Schetti'
results = mapper_search.search(s, self.session)
self.assertEqual(results, [g3])
def test_search_by_query_synonyms_disabled(self):
"""SynonymSearch strategy gives all synonyms of given taxon."""
Family = self.Family
Genus = self.Genus
family2 = Family(epithet=u'family2')
g2 = Genus(family=family2, epithet=u'genus2')
f3 = Family(epithet=u'fam3', aggregate=u'agg.')
g3 = Genus(family=f3, epithet=u'Ixora')
g4 = Genus(family=f3, epithet=u'Schetti')
self.session.add_all([family2, g2, f3, g3, g4])
g4.accepted = g3
self.session.commit()
prefs.prefs['bauble.search.return_synonyms'] = False
mapper_search = search.get_strategy('SynonymSearch')
s = 'Schetti'
results = mapper_search.search(s, self.session)
self.assertEqual(results, [])
def test_search_by_query_synonyms_disabled(self):
"""SynonymSearch strategy gives all synonyms of given taxon."""
Family = self.Family
Genus = self.Genus
family2 = Family(epithet=u'family2')
g2 = Genus(family=family2, epithet=u'genus2')
f3 = Family(epithet=u'fam3', aggregate=u'agg.')
g3 = Genus(family=f3, epithet=u'Ixora')
g4 = Genus(family=f3, epithet=u'Schetti')
self.session.add_all([family2, g2, f3, g3, g4])
g4.accepted = g3
self.session.commit()
prefs.prefs['bauble.search.return_synonyms'] = False
mapper_search = search.get_strategy('SynonymSearch')
s = 'Schetti'
results = mapper_search.search(s, self.session)
self.assertEqual(results, [])
