def __init__(self): databases = Databases() self.signature_modules = databases.signature_modules self.m2def = databases.m2def() self.modules = databases.m() self.ko_output = "module_completeness.tsv" self.module_paths = "module_paths.tsv" self.aggregate_output = "aggregate_output.tsv"
def __init__(self): d = Databases() self.m2def = d.m2def() self.m2c = d.m2c() self.c = d.c() self.m = d.m() self.c2m = d.c2m() self.signature_modules = d.signature_modules self.output_file = 'linkages.tsv'
def __init__(self): databases = Databases() self.signature_modules = databases.signature_modules self.m2def = databases.m2def() self.m = databases.m()